Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Gm14760-201ENSMUST00000121831 999 ntBASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Gm43133-201ENSMUST00000197472 463 ntBASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.44
Upk3aQ9JKX8 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Upk3aQ9JKX8 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Upk3aQ9JKX8 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Upk3aQ9JKX8 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Upk3aQ9JKX8 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Upk3aQ9JKX8 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Upk3aQ9JKX8 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Upk3aQ9JKX8 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Upk3aQ9JKX8 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Upk3aQ9JKX8 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Upk3aQ9JKX8 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3aQ9JKX8 Gm13392-201ENSMUST00000117708 150 ntBASIC12.27□□□□□ -0.45
Upk3aQ9JKX8 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3aQ9JKX8 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.27□□□□□ -0.45
Upk3aQ9JKX8 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3aQ9JKX8 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3aQ9JKX8 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3aQ9JKX8 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3aQ9JKX8 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.27□□□□□ -0.45
Upk3aQ9JKX8 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Upk3aQ9JKX8 Gm8018-201ENSMUST00000173536 789 ntBASIC12.27□□□□□ -0.45
Upk3aQ9JKX8 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Upk3aQ9JKX8 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3aQ9JKX8 Gm45880-201ENSMUST00000213041 853 ntBASIC12.27□□□□□ -0.45
Upk3aQ9JKX8 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.27□□□□□ -0.45
Upk3aQ9JKX8 Gm45930-201ENSMUST00000221330 292 ntBASIC12.27□□□□□ -0.45
Upk3aQ9JKX8 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3aQ9JKX8 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Upk3aQ9JKX8 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3aQ9JKX8 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3aQ9JKX8 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.27□□□□□ -0.45
Upk3aQ9JKX8 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Upk3aQ9JKX8 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3aQ9JKX8 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3aQ9JKX8 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3aQ9JKX8 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3aQ9JKX8 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Upk3aQ9JKX8 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Upk3aQ9JKX8 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3aQ9JKX8 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Upk3aQ9JKX8 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3aQ9JKX8 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Gm13316-201ENSMUST00000140537 691 ntBASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Gm43118-201ENSMUST00000199149 775 ntBASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Gm5904-201ENSMUST00000210286 865 ntBASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms