Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.9□□□□□ -0.5
Cdc40Q9DC48 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdc40Q9DC48 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.9□□□□□ -0.5
Cdc40Q9DC48 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Cdc40Q9DC48 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.9□□□□□ -0.5
Cdc40Q9DC48 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdc40Q9DC48 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdc40Q9DC48 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdc40Q9DC48 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdc40Q9DC48 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.9□□□□□ -0.5
Cdc40Q9DC48 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdc40Q9DC48 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdc40Q9DC48 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdc40Q9DC48 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdc40Q9DC48 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.9□□□□□ -0.5
Cdc40Q9DC48 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cdc40Q9DC48 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cdc40Q9DC48 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cdc40Q9DC48 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.9□□□□□ -0.51
Cdc40Q9DC48 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdc40Q9DC48 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.89□□□□□ -0.51
Cdc40Q9DC48 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Gm37497-201ENSMUST00000195830 798 ntBASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Gm44069-201ENSMUST00000204898 506 ntBASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdc40Q9DC48 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdc40Q9DC48 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Gm11978-201ENSMUST00000122315 466 ntBASIC11.88□□□□□ -0.51
Cdc40Q9DC48 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Gm38002-201ENSMUST00000193255 180 ntBASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms