Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndc80Q9D0F1 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndc80Q9D0F1 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndc80Q9D0F1 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ndc80Q9D0F1 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndc80Q9D0F1 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndc80Q9D0F1 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.02□□□□□ -0.33
Ndc80Q9D0F1 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ndc80Q9D0F1 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ndc80Q9D0F1 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndc80Q9D0F1 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Gm12203-201ENSMUST00000118235 598 ntBASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Gm12209-201ENSMUST00000120089 596 ntBASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Ndc80Q9D0F1 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc80Q9D0F1 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Ndc80Q9D0F1 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc80Q9D0F1 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc80Q9D0F1 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ndc80Q9D0F1 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc80Q9D0F1 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc80Q9D0F1 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ndc80Q9D0F1 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc80Q9D0F1 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc80Q9D0F1 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ndc80Q9D0F1 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc80Q9D0F1 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ndc80Q9D0F1 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Ndc80Q9D0F1 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc80Q9D0F1 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc80Q9D0F1 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc80Q9D0F1 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc80Q9D0F1 Gm13123-201ENSMUST00000122173 492 ntBASIC13□□□□□ -0.33
Ndc80Q9D0F1 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc80Q9D0F1 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13□□□□□ -0.33
Ndc80Q9D0F1 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ndc80Q9D0F1 Gm27847-201ENSMUST00000183711 107 ntBASIC13□□□□□ -0.33
Ndc80Q9D0F1 Gm27375-201ENSMUST00000183799 107 ntBASIC13□□□□□ -0.33
Ndc80Q9D0F1 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13□□□□□ -0.33
Ndc80Q9D0F1 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13□□□□□ -0.33
Ndc80Q9D0F1 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13□□□□□ -0.33
Ndc80Q9D0F1 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc80Q9D0F1 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc80Q9D0F1 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Ndc80Q9D0F1 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc80Q9D0F1 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc80Q9D0F1 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ndc80Q9D0F1 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ndc80Q9D0F1 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ndc80Q9D0F1 Gm38376-201ENSMUST00000195493 2253 ntBASIC13□□□□□ -0.33
Ndc80Q9D0F1 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc80Q9D0F1 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ndc80Q9D0F1 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13□□□□□ -0.33
Ndc80Q9D0F1 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ndc80Q9D0F1 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms