Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smc3Q9CW03 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc3Q9CW03 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC15□□□□□ -0.01
Smc3Q9CW03 Gm5422-201ENSMUST00000050717 2721 ntBASIC15□□□□□ -0.01
Smc3Q9CW03 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc3Q9CW03 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smc3Q9CW03 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc3Q9CW03 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smc3Q9CW03 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15□□□□□ -0.01
Smc3Q9CW03 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc3Q9CW03 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smc3Q9CW03 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15□□□□□ -0.01
Smc3Q9CW03 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc3Q9CW03 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Smc3Q9CW03 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc3Q9CW03 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC15□□□□□ -0.01
Smc3Q9CW03 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15□□□□□ -0.01
Smc3Q9CW03 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15□□□□□ -0.01
Smc3Q9CW03 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Smc3Q9CW03 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc3Q9CW03 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc3Q9CW03 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc3Q9CW03 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Smc3Q9CW03 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc3Q9CW03 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc3Q9CW03 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc3Q9CW03 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Smc3Q9CW03 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc3Q9CW03 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Smc3Q9CW03 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc3Q9CW03 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc3Q9CW03 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smc3Q9CW03 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smc3Q9CW03 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc3Q9CW03 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc3Q9CW03 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc3Q9CW03 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc3Q9CW03 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc3Q9CW03 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc3Q9CW03 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smc3Q9CW03 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc3Q9CW03 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Smc3Q9CW03 Gm11618-201ENSMUST00000117946 267 ntBASIC14.99□□□□□ -0.01
Smc3Q9CW03 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.99□□□□□ -0.01
Smc3Q9CW03 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Smc3Q9CW03 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.99□□□□□ -0.01
Smc3Q9CW03 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc3Q9CW03 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smc3Q9CW03 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smc3Q9CW03 Gm8463-201ENSMUST00000208573 613 ntBASIC14.99□□□□□ -0.01
Smc3Q9CW03 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.99□□□□□ -0.01
Smc3Q9CW03 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.99□□□□□ -0.01
Smc3Q9CW03 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.99□□□□□ -0.01
Smc3Q9CW03 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc3Q9CW03 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc3Q9CW03 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc3Q9CW03 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Smc3Q9CW03 Matn2-203ENSMUST00000226766 3252 ntBASIC14.99□□□□□ -0.01
Smc3Q9CW03 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc3Q9CW03 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc3Q9CW03 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc3Q9CW03 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smc3Q9CW03 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc3Q9CW03 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc3Q9CW03 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc3Q9CW03 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Smc3Q9CW03 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc3Q9CW03 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smc3Q9CW03 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.98□□□□□ -0.01
Smc3Q9CW03 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smc3Q9CW03 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc3Q9CW03 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.98□□□□□ -0.01
Smc3Q9CW03 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc3Q9CW03 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.98□□□□□ -0.01
Smc3Q9CW03 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smc3Q9CW03 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smc3Q9CW03 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc3Q9CW03 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc3Q9CW03 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Smc3Q9CW03 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Smc3Q9CW03 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc3Q9CW03 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smc3Q9CW03 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Smc3Q9CW03 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.98□□□□□ -0.01
Smc3Q9CW03 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smc3Q9CW03 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.98□□□□□ -0.01
Smc3Q9CW03 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Smc3Q9CW03 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc3Q9CW03 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Smc3Q9CW03 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Smc3Q9CW03 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc3Q9CW03 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc3Q9CW03 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc3Q9CW03 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc3Q9CW03 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.98□□□□□ -0.01
Smc3Q9CW03 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
Smc3Q9CW03 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smc3Q9CW03 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc3Q9CW03 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smc3Q9CW03 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms