Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm13369-201ENSMUST00000119442 987 ntBASIC12.74□□□□□ -0.37
Trim33Q99PP7 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Gm28693-202ENSMUST00000190758 331 ntBASIC12.74□□□□□ -0.37
Trim33Q99PP7 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Gm37497-201ENSMUST00000195830 798 ntBASIC12.74□□□□□ -0.37
Trim33Q99PP7 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Gm18187-201ENSMUST00000196476 984 ntBASIC12.74□□□□□ -0.37
Trim33Q99PP7 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Gm29705-201ENSMUST00000212598 474 ntBASIC12.74□□□□□ -0.37
Trim33Q99PP7 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim33Q99PP7 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim33Q99PP7 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim33Q99PP7 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim33Q99PP7 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trim33Q99PP7 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim33Q99PP7 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trim33Q99PP7 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim33Q99PP7 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim33Q99PP7 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim33Q99PP7 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.73□□□□□ -0.37
Trim33Q99PP7 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim33Q99PP7 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Trim33Q99PP7 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
Trim33Q99PP7 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim33Q99PP7 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim33Q99PP7 Gm29649-201ENSMUST00000185649 419 ntBASIC12.73□□□□□ -0.37
Trim33Q99PP7 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.73□□□□□ -0.37
Trim33Q99PP7 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.73□□□□□ -0.37
Trim33Q99PP7 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim33Q99PP7 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim33Q99PP7 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim33Q99PP7 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim33Q99PP7 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim33Q99PP7 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim33Q99PP7 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim33Q99PP7 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim33Q99PP7 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim33Q99PP7 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim33Q99PP7 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim33Q99PP7 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim33Q99PP7 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim33Q99PP7 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim33Q99PP7 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim33Q99PP7 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim33Q99PP7 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim33Q99PP7 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim33Q99PP7 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim33Q99PP7 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim33Q99PP7 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim33Q99PP7 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim33Q99PP7 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim33Q99PP7 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trim33Q99PP7 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.72□□□□□ -0.37
Trim33Q99PP7 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim33Q99PP7 Gm42449-201ENSMUST00000200349 2258 ntBASIC12.72□□□□□ -0.37
Trim33Q99PP7 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim33Q99PP7 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim33Q99PP7 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim33Q99PP7 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim33Q99PP7 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.72□□□□□ -0.37
Trim33Q99PP7 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim33Q99PP7 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim33Q99PP7 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim33Q99PP7 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim33Q99PP7 Gm4271-201ENSMUST00000174444 973 ntBASIC12.72□□□□□ -0.37
Trim33Q99PP7 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim33Q99PP7 Gm29127-201ENSMUST00000188304 517 ntBASIC12.72□□□□□ -0.37
Trim33Q99PP7 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms