Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.41□□□□□ -0.42
Rnf111Q99ML9 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.41□□□□□ -0.42
Rnf111Q99ML9 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.41□□□□□ -0.42
Rnf111Q99ML9 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf111Q99ML9 Gm8463-201ENSMUST00000208573 613 ntBASIC12.41□□□□□ -0.42
Rnf111Q99ML9 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.41□□□□□ -0.42
Rnf111Q99ML9 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.41□□□□□ -0.42
Rnf111Q99ML9 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.41□□□□□ -0.42
Rnf111Q99ML9 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf111Q99ML9 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf111Q99ML9 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf111Q99ML9 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.41□□□□□ -0.42
Rnf111Q99ML9 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.41□□□□□ -0.42
Rnf111Q99ML9 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.41□□□□□ -0.42
Rnf111Q99ML9 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
Rnf111Q99ML9 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf111Q99ML9 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf111Q99ML9 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf111Q99ML9 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.41□□□□□ -0.42
Rnf111Q99ML9 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rnf111Q99ML9 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.4□□□□□ -0.42
Rnf111Q99ML9 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Gm6152-201ENSMUST00000151704 340 ntBASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Gm44124-201ENSMUST00000204159 472 ntBASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf111Q99ML9 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rnf111Q99ML9 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
Rnf111Q99ML9 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rnf111Q99ML9 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rnf111Q99ML9 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Gm14127-201ENSMUST00000117906 678 ntBASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Gm5687-201ENSMUST00000118252 640 ntBASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Gm12490-201ENSMUST00000120255 560 ntBASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.39□□□□□ -0.43
Rnf111Q99ML9 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.39□□□□□ -0.43
Rnf111Q99ML9 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Gm18473-201ENSMUST00000220543 868 ntBASIC12.39□□□□□ -0.43
Rnf111Q99ML9 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms