Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scrt1Q99M85 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.24□□□□□ -0.61
Scrt1Q99M85 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.24□□□□□ -0.61
Scrt1Q99M85 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.24□□□□□ -0.61
Scrt1Q99M85 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Scrt1Q99M85 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Gm14726-201ENSMUST00000120623 896 ntBASIC11.23□□□□□ -0.61
Scrt1Q99M85 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.23□□□□□ -0.61
Scrt1Q99M85 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.23□□□□□ -0.61
Scrt1Q99M85 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Mir6927-201ENSMUST00000184494 71 ntBASIC11.23□□□□□ -0.61
Scrt1Q99M85 Mir7032-201ENSMUST00000185154 79 ntBASIC11.23□□□□□ -0.61
Scrt1Q99M85 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scrt1Q99M85 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.23□□□□□ -0.61
Scrt1Q99M85 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scrt1Q99M85 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scrt1Q99M85 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Scrt1Q99M85 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.22□□□□□ -0.61
Scrt1Q99M85 Gm15782-201ENSMUST00000121073 445 ntBASIC11.22□□□□□ -0.61
Scrt1Q99M85 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Gm37042-201ENSMUST00000193816 581 ntBASIC11.22□□□□□ -0.61
Scrt1Q99M85 Gm31256-201ENSMUST00000194705 506 ntBASIC11.22□□□□□ -0.61
Scrt1Q99M85 Gm5781-201ENSMUST00000219792 443 ntBASIC11.22□□□□□ -0.61
Scrt1Q99M85 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.22□□□□□ -0.61
Scrt1Q99M85 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.22□□□□□ -0.61
Scrt1Q99M85 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scrt1Q99M85 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scrt1Q99M85 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scrt1Q99M85 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms