Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Cog3-203ENSMUST00000227473 4197 ntBASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Gm5687-201ENSMUST00000118252 640 ntBASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Gm8463-201ENSMUST00000208573 613 ntBASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp1b1Q99LU0 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Mir1894-201ENSMUST00000122802 81 ntBASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Gm8602-201ENSMUST00000184045 607 ntBASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms