Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 Gm12928-201ENSMUST00000117115 573 ntBASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 Gm7488-201ENSMUST00000117148 684 ntBASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Cdk5rap3Q99LM2 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 Gm2423-201ENSMUST00000074863 733 ntBASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap3Q99LM2 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms