Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clp1Q99LI9 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.44□□□□□ -0.26
Clp1Q99LI9 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Clp1Q99LI9 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Clp1Q99LI9 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Clp1Q99LI9 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clp1Q99LI9 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clp1Q99LI9 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clp1Q99LI9 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clp1Q99LI9 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clp1Q99LI9 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clp1Q99LI9 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Clp1Q99LI9 Gm15711-201ENSMUST00000118889 535 ntBASIC13.44□□□□□ -0.26
Clp1Q99LI9 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Clp1Q99LI9 Gm11597-201ENSMUST00000121423 964 ntBASIC13.44□□□□□ -0.26
Clp1Q99LI9 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Clp1Q99LI9 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Clp1Q99LI9 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
Clp1Q99LI9 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.44□□□□□ -0.26
Clp1Q99LI9 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.44□□□□□ -0.26
Clp1Q99LI9 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clp1Q99LI9 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clp1Q99LI9 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clp1Q99LI9 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Clp1Q99LI9 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.44□□□□□ -0.26
Clp1Q99LI9 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clp1Q99LI9 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Clp1Q99LI9 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.44□□□□□ -0.26
Clp1Q99LI9 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clp1Q99LI9 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clp1Q99LI9 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clp1Q99LI9 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Clp1Q99LI9 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clp1Q99LI9 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Clp1Q99LI9 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clp1Q99LI9 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Clp1Q99LI9 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clp1Q99LI9 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Clp1Q99LI9 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Clp1Q99LI9 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clp1Q99LI9 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clp1Q99LI9 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clp1Q99LI9 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clp1Q99LI9 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clp1Q99LI9 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clp1Q99LI9 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.43□□□□□ -0.26
Clp1Q99LI9 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clp1Q99LI9 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.43□□□□□ -0.26
Clp1Q99LI9 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.43□□□□□ -0.26
Clp1Q99LI9 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.43□□□□□ -0.26
Clp1Q99LI9 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Clp1Q99LI9 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Clp1Q99LI9 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Clp1Q99LI9 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.43□□□□□ -0.26
Clp1Q99LI9 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Clp1Q99LI9 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Clp1Q99LI9 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Clp1Q99LI9 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clp1Q99LI9 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.43□□□□□ -0.26
Clp1Q99LI9 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.43□□□□□ -0.26
Clp1Q99LI9 Ntng1-201ENSMUST00000051253 327 ntBASIC13.43□□□□□ -0.26
Clp1Q99LI9 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clp1Q99LI9 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Clp1Q99LI9 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clp1Q99LI9 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Clp1Q99LI9 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clp1Q99LI9 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clp1Q99LI9 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clp1Q99LI9 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clp1Q99LI9 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clp1Q99LI9 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clp1Q99LI9 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Clp1Q99LI9 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Clp1Q99LI9 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.43□□□□□ -0.26
Clp1Q99LI9 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clp1Q99LI9 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clp1Q99LI9 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clp1Q99LI9 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clp1Q99LI9 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clp1Q99LI9 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Clp1Q99LI9 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clp1Q99LI9 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clp1Q99LI9 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clp1Q99LI9 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clp1Q99LI9 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clp1Q99LI9 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clp1Q99LI9 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clp1Q99LI9 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clp1Q99LI9 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms