Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
RtcbQ99LF4 Gm10752-201ENSMUST00000218348 729 ntBASIC15.7■□□□□ 0.1
RtcbQ99LF4 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC15.7■□□□□ 0.1
RtcbQ99LF4 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RtcbQ99LF4 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
RtcbQ99LF4 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RtcbQ99LF4 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
RtcbQ99LF4 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RtcbQ99LF4 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RtcbQ99LF4 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RtcbQ99LF4 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RtcbQ99LF4 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RtcbQ99LF4 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
RtcbQ99LF4 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RtcbQ99LF4 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RtcbQ99LF4 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RtcbQ99LF4 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RtcbQ99LF4 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RtcbQ99LF4 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RtcbQ99LF4 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RtcbQ99LF4 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RtcbQ99LF4 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC15.69■□□□□ 0.1
RtcbQ99LF4 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.69■□□□□ 0.1
RtcbQ99LF4 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RtcbQ99LF4 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RtcbQ99LF4 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RtcbQ99LF4 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RtcbQ99LF4 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RtcbQ99LF4 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RtcbQ99LF4 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RtcbQ99LF4 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC15.69■□□□□ 0.1
RtcbQ99LF4 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RtcbQ99LF4 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC15.69■□□□□ 0.1
RtcbQ99LF4 Gm43916-201ENSMUST00000205062 967 ntBASIC15.69■□□□□ 0.1
RtcbQ99LF4 Gm1821-202ENSMUST00000227415 750 ntBASIC15.69■□□□□ 0.1
RtcbQ99LF4 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RtcbQ99LF4 Gm9996-201ENSMUST00000070359 913 ntBASIC15.69■□□□□ 0.1
RtcbQ99LF4 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
RtcbQ99LF4 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
RtcbQ99LF4 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RtcbQ99LF4 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
RtcbQ99LF4 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC15.69■□□□□ 0.1
RtcbQ99LF4 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC15.69■□□□□ 0.1
RtcbQ99LF4 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RtcbQ99LF4 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RtcbQ99LF4 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.69■□□□□ 0.1
RtcbQ99LF4 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RtcbQ99LF4 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.69■□□□□ 0.1
RtcbQ99LF4 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RtcbQ99LF4 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.69■□□□□ 0.1
RtcbQ99LF4 Gm5525-201ENSMUST00000190438 1312 ntBASIC15.68■□□□□ 0.1
RtcbQ99LF4 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Gm22133-201ENSMUST00000102082 109 ntBASIC15.68■□□□□ 0.1
RtcbQ99LF4 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC15.68■□□□□ 0.1
RtcbQ99LF4 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Gm17391-201ENSMUST00000171036 126 ntBASIC15.68■□□□□ 0.1
RtcbQ99LF4 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RtcbQ99LF4 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC15.68■□□□□ 0.1
RtcbQ99LF4 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC15.68■□□□□ 0.1
RtcbQ99LF4 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RtcbQ99LF4 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.68■□□□□ 0.1
RtcbQ99LF4 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RtcbQ99LF4 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RtcbQ99LF4 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RtcbQ99LF4 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RtcbQ99LF4 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RtcbQ99LF4 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RtcbQ99LF4 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms