Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Vmp1Q99KU0 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Mir874-201ENSMUST00000104769 76 ntBASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vmp1Q99KU0 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vmp1Q99KU0 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms