Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfc4Q99J62 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfc4Q99J62 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rfc4Q99J62 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Rfc4Q99J62 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfc4Q99J62 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfc4Q99J62 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfc4Q99J62 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfc4Q99J62 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfc4Q99J62 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.7□□□□□ -0.06
Rfc4Q99J62 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Rfc4Q99J62 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfc4Q99J62 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rfc4Q99J62 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.7□□□□□ -0.06
Rfc4Q99J62 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rfc4Q99J62 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.7□□□□□ -0.06
Rfc4Q99J62 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rfc4Q99J62 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
Rfc4Q99J62 Gm20426-201ENSMUST00000173657 440 ntBASIC14.7□□□□□ -0.06
Rfc4Q99J62 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Rfc4Q99J62 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.7□□□□□ -0.06
Rfc4Q99J62 Rprl1-202ENSMUST00000198476 238 ntBASIC14.7□□□□□ -0.06
Rfc4Q99J62 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.7□□□□□ -0.06
Rfc4Q99J62 Gm45224-201ENSMUST00000208203 414 ntBASIC14.7□□□□□ -0.06
Rfc4Q99J62 Gm45433-201ENSMUST00000209386 247 ntBASIC14.7□□□□□ -0.06
Rfc4Q99J62 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.7□□□□□ -0.06
Rfc4Q99J62 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Rfc4Q99J62 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.7□□□□□ -0.06
Rfc4Q99J62 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfc4Q99J62 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfc4Q99J62 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfc4Q99J62 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfc4Q99J62 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfc4Q99J62 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfc4Q99J62 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Rfc4Q99J62 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc4Q99J62 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.69□□□□□ -0.06
Rfc4Q99J62 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Gm8546-201ENSMUST00000178288 1264 ntBASIC14.69□□□□□ -0.06
Rfc4Q99J62 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc4Q99J62 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.69□□□□□ -0.06
Rfc4Q99J62 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.69□□□□□ -0.06
Rfc4Q99J62 AC154680.1-201ENSMUST00000224376 859 ntBASIC14.69□□□□□ -0.06
Rfc4Q99J62 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.69□□□□□ -0.06
Rfc4Q99J62 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc4Q99J62 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc4Q99J62 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc4Q99J62 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc4Q99J62 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc4Q99J62 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc4Q99J62 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Rfc4Q99J62 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Rfc4Q99J62 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc4Q99J62 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc4Q99J62 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.68□□□□□ -0.06
Rfc4Q99J62 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc4Q99J62 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc4Q99J62 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Rfc4Q99J62 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.68□□□□□ -0.06
Rfc4Q99J62 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc4Q99J62 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc4Q99J62 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc4Q99J62 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Rfc4Q99J62 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc4Q99J62 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC14.68□□□□□ -0.06
Rfc4Q99J62 Gm8018-201ENSMUST00000173536 789 ntBASIC14.68□□□□□ -0.06
Rfc4Q99J62 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc4Q99J62 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms