Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clip1Q922J3 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clip1Q922J3 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clip1Q922J3 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clip1Q922J3 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clip1Q922J3 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Clip1Q922J3 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Clip1Q922J3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clip1Q922J3 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clip1Q922J3 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clip1Q922J3 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clip1Q922J3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clip1Q922J3 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC19.86■□□□□ 0.77
Clip1Q922J3 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clip1Q922J3 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC19.86■□□□□ 0.77
Clip1Q922J3 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clip1Q922J3 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC19.86■□□□□ 0.77
Clip1Q922J3 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Clip1Q922J3 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clip1Q922J3 Gm9230-201ENSMUST00000188228 532 ntBASIC19.86■□□□□ 0.77
Clip1Q922J3 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clip1Q922J3 AU022133-201ENSMUST00000200601 873 ntBASIC19.86■□□□□ 0.77
Clip1Q922J3 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clip1Q922J3 Gm18730-201ENSMUST00000218038 343 ntBASIC19.86■□□□□ 0.77
Clip1Q922J3 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clip1Q922J3 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clip1Q922J3 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clip1Q922J3 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clip1Q922J3 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Clip1Q922J3 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Clip1Q922J3 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clip1Q922J3 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC19.86■□□□□ 0.77
Clip1Q922J3 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Clip1Q922J3 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clip1Q922J3 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC19.86■□□□□ 0.77
Clip1Q922J3 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clip1Q922J3 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clip1Q922J3 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clip1Q922J3 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clip1Q922J3 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC19.85■□□□□ 0.77
Clip1Q922J3 Gm45638-201ENSMUST00000211507 2878 ntBASIC19.85■□□□□ 0.77
Clip1Q922J3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clip1Q922J3 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clip1Q922J3 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Clip1Q922J3 Gm12266-201ENSMUST00000120311 962 ntBASIC19.85■□□□□ 0.77
Clip1Q922J3 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC19.85■□□□□ 0.77
Clip1Q922J3 Gm23119-201ENSMUST00000158610 140 ntBASIC19.85■□□□□ 0.77
Clip1Q922J3 Gm18734-201ENSMUST00000172937 808 ntBASIC19.85■□□□□ 0.77
Clip1Q922J3 Gm18304-201ENSMUST00000189162 546 ntBASIC19.85■□□□□ 0.77
Clip1Q922J3 Gm42997-202ENSMUST00000200321 985 ntBASIC19.85■□□□□ 0.77
Clip1Q922J3 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clip1Q922J3 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clip1Q922J3 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clip1Q922J3 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clip1Q922J3 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clip1Q922J3 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC19.85■□□□□ 0.77
Clip1Q922J3 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clip1Q922J3 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Clip1Q922J3 Gm38577-201ENSMUST00000221531 4545 ntBASIC19.85■□□□□ 0.77
Clip1Q922J3 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clip1Q922J3 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clip1Q922J3 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clip1Q922J3 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Clip1Q922J3 Gm8617-201ENSMUST00000118796 2222 ntBASIC19.85■□□□□ 0.77
Clip1Q922J3 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clip1Q922J3 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Clip1Q922J3 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clip1Q922J3 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC19.85■□□□□ 0.77
Clip1Q922J3 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clip1Q922J3 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clip1Q922J3 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clip1Q922J3 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Clip1Q922J3 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clip1Q922J3 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Clip1Q922J3 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC19.84■□□□□ 0.77
Clip1Q922J3 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clip1Q922J3 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clip1Q922J3 Gm20426-201ENSMUST00000173657 440 ntBASIC19.84■□□□□ 0.77
Clip1Q922J3 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC19.84■□□□□ 0.77
Clip1Q922J3 Gm8546-201ENSMUST00000178288 1264 ntBASIC19.84■□□□□ 0.77
Clip1Q922J3 Gm8959-201ENSMUST00000213150 571 ntBASIC19.84■□□□□ 0.77
Clip1Q922J3 AC154305.4-201ENSMUST00000224520 614 ntBASIC19.84■□□□□ 0.77
Clip1Q922J3 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clip1Q922J3 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clip1Q922J3 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clip1Q922J3 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Clip1Q922J3 Gm10702-201ENSMUST00000098929 1268 ntBASIC19.84■□□□□ 0.77
Clip1Q922J3 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clip1Q922J3 Gm44851-201ENSMUST00000205735 2309 ntBASIC19.84■□□□□ 0.77
Clip1Q922J3 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clip1Q922J3 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clip1Q922J3 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clip1Q922J3 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clip1Q922J3 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clip1Q922J3 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC19.84■□□□□ 0.77
Clip1Q922J3 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clip1Q922J3 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC19.84■□□□□ 0.77
Clip1Q922J3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clip1Q922J3 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Clip1Q922J3 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms