Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.57□□□□□ -0.24
Pcdha9Q91Y11 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha9Q91Y11 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha9Q91Y11 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha9Q91Y11 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha9Q91Y11 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha9Q91Y11 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha9Q91Y11 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.57□□□□□ -0.24
Pcdha9Q91Y11 Gm22018-201ENSMUST00000104357 131 ntBASIC13.57□□□□□ -0.24
Pcdha9Q91Y11 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pcdha9Q91Y11 Gm12742-201ENSMUST00000117326 410 ntBASIC13.57□□□□□ -0.24
Pcdha9Q91Y11 Gm12957-201ENSMUST00000117835 377 ntBASIC13.57□□□□□ -0.24
Pcdha9Q91Y11 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.57□□□□□ -0.24
Pcdha9Q91Y11 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha9Q91Y11 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha9Q91Y11 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.57□□□□□ -0.24
Pcdha9Q91Y11 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha9Q91Y11 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha9Q91Y11 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.57□□□□□ -0.24
Pcdha9Q91Y11 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.57□□□□□ -0.24
Pcdha9Q91Y11 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha9Q91Y11 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha9Q91Y11 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha9Q91Y11 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha9Q91Y11 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.57□□□□□ -0.24
Pcdha9Q91Y11 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha9Q91Y11 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha9Q91Y11 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.57□□□□□ -0.24
Pcdha9Q91Y11 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdha9Q91Y11 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 Gm5904-201ENSMUST00000210286 865 ntBASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 Gm19309-201ENSMUST00000218295 205 ntBASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdha9Q91Y11 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Gm8062-201ENSMUST00000139696 444 ntBASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms