Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Gm16420-201ENSMUST00000120258 856 ntBASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Gm4804-201ENSMUST00000182234 999 ntBASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Gm5425-201ENSMUST00000214125 459 ntBASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Gm20445-201ENSMUST00000061905 565 ntBASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Asb11-201ENSMUST00000033755 1369 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb3Q91XZ7 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Gm37533-201ENSMUST00000193848 545 ntBASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb3Q91XZ7 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Gm11424-201ENSMUST00000121929 829 ntBASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms