Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.6□□□□□ -0.07
Trex1Q91XB0 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Gm6963-201ENSMUST00000147879 379 ntBASIC14.6□□□□□ -0.07
Trex1Q91XB0 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Gm5070-201ENSMUST00000177599 862 ntBASIC14.6□□□□□ -0.07
Trex1Q91XB0 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Rprl1-202ENSMUST00000198476 238 ntBASIC14.6□□□□□ -0.07
Trex1Q91XB0 Gm8913-201ENSMUST00000209491 641 ntBASIC14.6□□□□□ -0.07
Trex1Q91XB0 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Nsd1-205ENSMUST00000224693 852 ntBASIC14.6□□□□□ -0.07
Trex1Q91XB0 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trex1Q91XB0 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trex1Q91XB0 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trex1Q91XB0 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.59□□□□□ -0.07
Trex1Q91XB0 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Trex1Q91XB0 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trex1Q91XB0 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trex1Q91XB0 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trex1Q91XB0 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trex1Q91XB0 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trex1Q91XB0 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trex1Q91XB0 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trex1Q91XB0 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trex1Q91XB0 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trex1Q91XB0 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trex1Q91XB0 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trex1Q91XB0 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trex1Q91XB0 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.59□□□□□ -0.07
Trex1Q91XB0 Gm13296-201ENSMUST00000117854 997 ntBASIC14.59□□□□□ -0.07
Trex1Q91XB0 Gm12314-201ENSMUST00000118104 538 ntBASIC14.59□□□□□ -0.07
Trex1Q91XB0 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.59□□□□□ -0.07
Trex1Q91XB0 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.59□□□□□ -0.07
Trex1Q91XB0 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.59□□□□□ -0.07
Trex1Q91XB0 Gm28450-201ENSMUST00000187349 638 ntBASIC14.59□□□□□ -0.07
Trex1Q91XB0 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trex1Q91XB0 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trex1Q91XB0 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trex1Q91XB0 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
Trex1Q91XB0 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trex1Q91XB0 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trex1Q91XB0 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trex1Q91XB0 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trex1Q91XB0 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.59□□□□□ -0.07
Trex1Q91XB0 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trex1Q91XB0 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Trex1Q91XB0 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Trex1Q91XB0 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trex1Q91XB0 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trex1Q91XB0 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trex1Q91XB0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trex1Q91XB0 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trex1Q91XB0 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trex1Q91XB0 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.58□□□□□ -0.08
Trex1Q91XB0 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trex1Q91XB0 Gm12015-201ENSMUST00000117065 843 ntBASIC14.58□□□□□ -0.08
Trex1Q91XB0 Gm15703-201ENSMUST00000120250 880 ntBASIC14.58□□□□□ -0.08
Trex1Q91XB0 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.58□□□□□ -0.08
Trex1Q91XB0 Gm25732-201ENSMUST00000175168 60 ntBASIC14.58□□□□□ -0.08
Trex1Q91XB0 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trex1Q91XB0 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.58□□□□□ -0.08
Trex1Q91XB0 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.58□□□□□ -0.08
Trex1Q91XB0 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.58□□□□□ -0.08
Trex1Q91XB0 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.58□□□□□ -0.08
Trex1Q91XB0 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC14.58□□□□□ -0.08
Trex1Q91XB0 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trex1Q91XB0 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trex1Q91XB0 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trex1Q91XB0 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trex1Q91XB0 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trex1Q91XB0 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trex1Q91XB0 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trex1Q91XB0 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trex1Q91XB0 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms