Protein–RNA interactions for Protein: Q91VR5

Ddx1, ATP-dependent RNA helicase DDX1, mousemouse

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1Q91VR5 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx1Q91VR5 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Ddx1Q91VR5 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx1Q91VR5 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx1Q91VR5 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Gm15782-201ENSMUST00000121073 445 ntBASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Gm16379-201ENSMUST00000161469 348 ntBASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Gm22121-201ENSMUST00000175148 54 ntBASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Gm8762-201ENSMUST00000193486 339 ntBASIC13.22□□□□□ -0.29
Ddx1Q91VR5 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.22□□□□□ -0.29
Ddx1Q91VR5 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Gm10268-201ENSMUST00000085340 555 ntBASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx1Q91VR5 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Gm14704-201ENSMUST00000120300 874 ntBASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Gm2231-201ENSMUST00000125661 612 ntBASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Gm26927-201ENSMUST00000182385 965 ntBASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Gm37042-201ENSMUST00000193816 581 ntBASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Gm10146-201ENSMUST00000072739 309 ntBASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Mir339-201ENSMUST00000083659 96 ntBASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.21□□□□□ -0.29
Ddx1Q91VR5 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx1Q91VR5 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx1Q91VR5 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx1Q91VR5 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx1Q91VR5 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.21□□□□□ -0.3
Ddx1Q91VR5 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx1Q91VR5 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx1Q91VR5 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms