Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.65□□□□□ -0.22
TraipQ8VIG6 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TraipQ8VIG6 Gm25043-201ENSMUST00000158604 212 ntBASIC13.65□□□□□ -0.22
TraipQ8VIG6 Ap1g1-206ENSMUST00000179104 1096 ntBASIC13.65□□□□□ -0.22
TraipQ8VIG6 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TraipQ8VIG6 Gm28064-201ENSMUST00000185639 858 ntBASIC13.65□□□□□ -0.22
TraipQ8VIG6 Gm28975-201ENSMUST00000186412 686 ntBASIC13.65□□□□□ -0.22
TraipQ8VIG6 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.65□□□□□ -0.22
TraipQ8VIG6 Gm37201-201ENSMUST00000191845 523 ntBASIC13.65□□□□□ -0.22
TraipQ8VIG6 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.65□□□□□ -0.22
TraipQ8VIG6 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.65□□□□□ -0.22
TraipQ8VIG6 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TraipQ8VIG6 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.65□□□□□ -0.22
TraipQ8VIG6 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TraipQ8VIG6 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TraipQ8VIG6 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TraipQ8VIG6 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TraipQ8VIG6 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TraipQ8VIG6 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TraipQ8VIG6 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.65□□□□□ -0.22
TraipQ8VIG6 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.65□□□□□ -0.22
TraipQ8VIG6 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TraipQ8VIG6 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TraipQ8VIG6 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TraipQ8VIG6 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TraipQ8VIG6 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.65□□□□□ -0.22
TraipQ8VIG6 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TraipQ8VIG6 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.23
TraipQ8VIG6 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
TraipQ8VIG6 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
TraipQ8VIG6 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
TraipQ8VIG6 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
TraipQ8VIG6 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.64□□□□□ -0.23
TraipQ8VIG6 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.64□□□□□ -0.23
TraipQ8VIG6 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TraipQ8VIG6 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TraipQ8VIG6 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TraipQ8VIG6 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TraipQ8VIG6 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TraipQ8VIG6 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TraipQ8VIG6 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TraipQ8VIG6 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.64□□□□□ -0.23
TraipQ8VIG6 Gm15276-201ENSMUST00000145953 498 ntBASIC13.64□□□□□ -0.23
TraipQ8VIG6 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TraipQ8VIG6 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TraipQ8VIG6 Gm27023-201ENSMUST00000182372 285 ntBASIC13.64□□□□□ -0.23
TraipQ8VIG6 Gm3096-201ENSMUST00000185770 364 ntBASIC13.64□□□□□ -0.23
TraipQ8VIG6 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TraipQ8VIG6 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.64□□□□□ -0.23
TraipQ8VIG6 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TraipQ8VIG6 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TraipQ8VIG6 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TraipQ8VIG6 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TraipQ8VIG6 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.64□□□□□ -0.23
TraipQ8VIG6 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.64□□□□□ -0.23
TraipQ8VIG6 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TraipQ8VIG6 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC13.64□□□□□ -0.23
TraipQ8VIG6 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TraipQ8VIG6 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TraipQ8VIG6 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TraipQ8VIG6 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TraipQ8VIG6 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TraipQ8VIG6 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TraipQ8VIG6 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TraipQ8VIG6 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TraipQ8VIG6 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TraipQ8VIG6 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.64□□□□□ -0.23
TraipQ8VIG6 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TraipQ8VIG6 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
TraipQ8VIG6 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
TraipQ8VIG6 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TraipQ8VIG6 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TraipQ8VIG6 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TraipQ8VIG6 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TraipQ8VIG6 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.63□□□□□ -0.23
TraipQ8VIG6 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TraipQ8VIG6 Gm12314-201ENSMUST00000118104 538 ntBASIC13.63□□□□□ -0.23
TraipQ8VIG6 Gm14109-201ENSMUST00000118814 309 ntBASIC13.63□□□□□ -0.23
TraipQ8VIG6 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TraipQ8VIG6 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TraipQ8VIG6 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TraipQ8VIG6 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TraipQ8VIG6 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.63□□□□□ -0.23
TraipQ8VIG6 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.63□□□□□ -0.23
TraipQ8VIG6 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TraipQ8VIG6 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TraipQ8VIG6 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TraipQ8VIG6 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TraipQ8VIG6 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.63□□□□□ -0.23
TraipQ8VIG6 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TraipQ8VIG6 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TraipQ8VIG6 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
TraipQ8VIG6 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TraipQ8VIG6 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TraipQ8VIG6 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TraipQ8VIG6 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms