Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Gm14723-201ENSMUST00000118686 215 ntBASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkd2Q8VE28 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Gm37922-201ENSMUST00000195596 455 ntBASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Gm37008-201ENSMUST00000195712 319 ntBASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Gm43822-201ENSMUST00000200285 476 ntBASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms