Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.17□□□□□ -0.14
Ddx39aQ8VDW0 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.17□□□□□ -0.14
Ddx39aQ8VDW0 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx39aQ8VDW0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ddx39aQ8VDW0 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx39aQ8VDW0 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
Ddx39aQ8VDW0 Gm14921-201ENSMUST00000118643 908 ntBASIC14.17□□□□□ -0.14
Ddx39aQ8VDW0 Gm12012-201ENSMUST00000118857 1066 ntBASIC14.17□□□□□ -0.14
Ddx39aQ8VDW0 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx39aQ8VDW0 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.17□□□□□ -0.14
Ddx39aQ8VDW0 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx39aQ8VDW0 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx39aQ8VDW0 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.17□□□□□ -0.14
Ddx39aQ8VDW0 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.17□□□□□ -0.14
Ddx39aQ8VDW0 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.17□□□□□ -0.14
Ddx39aQ8VDW0 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx39aQ8VDW0 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.17□□□□□ -0.14
Ddx39aQ8VDW0 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx39aQ8VDW0 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx39aQ8VDW0 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ddx39aQ8VDW0 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx39aQ8VDW0 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ddx39aQ8VDW0 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx39aQ8VDW0 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx39aQ8VDW0 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.17□□□□□ -0.14
Ddx39aQ8VDW0 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.17□□□□□ -0.14
Ddx39aQ8VDW0 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx39aQ8VDW0 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ddx39aQ8VDW0 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ddx39aQ8VDW0 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Gm24830-201ENSMUST00000102024 166 ntBASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Gm25043-201ENSMUST00000158604 212 ntBASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Gm25890-201ENSMUST00000177643 165 ntBASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Gm22614-201ENSMUST00000178300 165 ntBASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Gm18827-201ENSMUST00000188341 790 ntBASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Gm37201-201ENSMUST00000191845 523 ntBASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Gm37466-201ENSMUST00000195692 652 ntBASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Gm22042-201ENSMUST00000082989 165 ntBASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Gm26232-201ENSMUST00000083360 166 ntBASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Gm24136-201ENSMUST00000083374 165 ntBASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Rnu1b6-201ENSMUST00000083839 166 ntBASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Gm26110-201ENSMUST00000083971 165 ntBASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Gm10782-202ENSMUST00000223775 1480 ntBASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx39aQ8VDW0 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.15□□□□□ -0.14
Ddx39aQ8VDW0 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx39aQ8VDW0 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx39aQ8VDW0 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx39aQ8VDW0 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ddx39aQ8VDW0 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx39aQ8VDW0 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx39aQ8VDW0 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx39aQ8VDW0 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx39aQ8VDW0 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx39aQ8VDW0 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx39aQ8VDW0 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx39aQ8VDW0 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.15□□□□□ -0.14
Ddx39aQ8VDW0 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.15□□□□□ -0.14
Ddx39aQ8VDW0 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx39aQ8VDW0 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Ddx39aQ8VDW0 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ddx39aQ8VDW0 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx39aQ8VDW0 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx39aQ8VDW0 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx39aQ8VDW0 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.15□□□□□ -0.14
Ddx39aQ8VDW0 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC14.15□□□□□ -0.14
Ddx39aQ8VDW0 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.15□□□□□ -0.14
Ddx39aQ8VDW0 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.15□□□□□ -0.14
Ddx39aQ8VDW0 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx39aQ8VDW0 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx39aQ8VDW0 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx39aQ8VDW0 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx39aQ8VDW0 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms