Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Q8VDP2 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Q8VDP2 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Q8VDP2 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Q8VDP2 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.45□□□□□ -0.42
Q8VDP2 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.45□□□□□ -0.42
Q8VDP2 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.45□□□□□ -0.42
Q8VDP2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Q8VDP2 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.45□□□□□ -0.42
Q8VDP2 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.45□□□□□ -0.42
Q8VDP2 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Q8VDP2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Q8VDP2 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Q8VDP2 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Q8VDP2 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.45□□□□□ -0.42
Q8VDP2 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.45□□□□□ -0.42
Q8VDP2 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.45□□□□□ -0.42
Q8VDP2 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Q8VDP2 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Q8VDP2 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 Gm8320-201ENSMUST00000177584 1762 ntBASIC12.44□□□□□ -0.42
Q8VDP2 Gm8303-201ENSMUST00000178371 1762 ntBASIC12.44□□□□□ -0.42
Q8VDP2 Gm8331-201ENSMUST00000178433 1762 ntBASIC12.44□□□□□ -0.42
Q8VDP2 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Q8VDP2 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.44□□□□□ -0.42
Q8VDP2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.44□□□□□ -0.42
Q8VDP2 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.44□□□□□ -0.42
Q8VDP2 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.44□□□□□ -0.42
Q8VDP2 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.44□□□□□ -0.42
Q8VDP2 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.44□□□□□ -0.42
Q8VDP2 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Q8VDP2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.44□□□□□ -0.42
Q8VDP2 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Q8VDP2 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms