Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 Gm37489-201ENSMUST00000191883 159 ntBASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 Gm43758-201ENSMUST00000199500 367 ntBASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndc1Q8VCB1 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Mospd4-201ENSMUST00000180618 576 ntBASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Mir7221-201ENSMUST00000184009 72 ntBASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Gm38341-201ENSMUST00000195357 515 ntBASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Gm45865-201ENSMUST00000211815 945 ntBASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Gm5781-201ENSMUST00000219792 443 ntBASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Gm8227-201ENSMUST00000223306 571 ntBASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms