Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Gm18018-201ENSMUST00000198273 408 ntBASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Gm44124-201ENSMUST00000204159 472 ntBASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Gm26035-201ENSMUST00000083065 308 ntBASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.26□□□□□ -0.45
Lsm1Q8VC85 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm1Q8VC85 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Gm14704-201ENSMUST00000120300 874 ntBASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Gm7287-201ENSMUST00000205267 602 ntBASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.25□□□□□ -0.45
Lsm1Q8VC85 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm1Q8VC85 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Gm8805-201ENSMUST00000117848 313 ntBASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Gm8213-201ENSMUST00000118191 441 ntBASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Gm14921-201ENSMUST00000118643 908 ntBASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Lsm1Q8VC85 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Lsm1Q8VC85 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms