Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.88□□□□□ -0.51
H2afjQ8R1M2 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.88□□□□□ -0.51
H2afjQ8R1M2 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.88□□□□□ -0.51
H2afjQ8R1M2 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afjQ8R1M2 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afjQ8R1M2 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
H2afjQ8R1M2 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afjQ8R1M2 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afjQ8R1M2 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afjQ8R1M2 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afjQ8R1M2 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afjQ8R1M2 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.88□□□□□ -0.51
H2afjQ8R1M2 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afjQ8R1M2 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afjQ8R1M2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Gm44397-201ENSMUST00000195950 113 ntBASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Gm6983-201ENSMUST00000214912 628 ntBASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afjQ8R1M2 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.86□□□□□ -0.51
H2afjQ8R1M2 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.86□□□□□ -0.51
H2afjQ8R1M2 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Gm7488-201ENSMUST00000117148 684 ntBASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Gm12859-201ENSMUST00000117834 427 ntBASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Gm6447-201ENSMUST00000118905 835 ntBASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Gm27437-201ENSMUST00000183429 107 ntBASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
H2afjQ8R1M2 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Itm2b-204ENSMUST00000228637 783 ntBASIC11.86□□□□□ -0.51
H2afjQ8R1M2 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afjQ8R1M2 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms