Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atf7Q8R0S1 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Atf7Q8R0S1 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atf7Q8R0S1 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atf7Q8R0S1 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf7Q8R0S1 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf7Q8R0S1 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf7Q8R0S1 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Atf7Q8R0S1 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.06■□□□□ 0
Atf7Q8R0S1 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf7Q8R0S1 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC15.06■□□□□ 0
Atf7Q8R0S1 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf7Q8R0S1 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf7Q8R0S1 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf7Q8R0S1 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf7Q8R0S1 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC15.06■□□□□ 0
Atf7Q8R0S1 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf7Q8R0S1 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC15.06■□□□□ 0
Atf7Q8R0S1 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.06■□□□□ 0
Atf7Q8R0S1 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Atf7Q8R0S1 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Atf7Q8R0S1 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.06■□□□□ 0
Atf7Q8R0S1 Gm38092-201ENSMUST00000195600 653 ntBASIC15.06■□□□□ 0
Atf7Q8R0S1 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC15.06■□□□□ 0
Atf7Q8R0S1 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf7Q8R0S1 AC165260.3-202ENSMUST00000224550 1031 ntBASIC15.06■□□□□ 0
Atf7Q8R0S1 AC022775.2-201ENSMUST00000227885 646 ntBASIC15.06■□□□□ 0
Atf7Q8R0S1 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf7Q8R0S1 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Atf7Q8R0S1 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Atf7Q8R0S1 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf7Q8R0S1 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC15.06■□□□□ 0
Atf7Q8R0S1 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf7Q8R0S1 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf7Q8R0S1 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Atf7Q8R0S1 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf7Q8R0S1 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Atf7Q8R0S1 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Atf7Q8R0S1 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf7Q8R0S1 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Atf7Q8R0S1 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Atf7Q8R0S1 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Atf7Q8R0S1 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Atf7Q8R0S1 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Atf7Q8R0S1 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Atf7Q8R0S1 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
Atf7Q8R0S1 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Atf7Q8R0S1 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Atf7Q8R0S1 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Atf7Q8R0S1 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atf7Q8R0S1 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atf7Q8R0S1 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atf7Q8R0S1 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.05■□□□□ -0
Atf7Q8R0S1 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC15.05■□□□□ -0
Atf7Q8R0S1 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC15.05■□□□□ -0
Atf7Q8R0S1 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC15.05■□□□□ -0
Atf7Q8R0S1 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.05■□□□□ -0
Atf7Q8R0S1 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC15.05■□□□□ -0
Atf7Q8R0S1 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.05■□□□□ -0
Atf7Q8R0S1 AC069562.3-201ENSMUST00000225387 587 ntBASIC15.05■□□□□ -0
Atf7Q8R0S1 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC15.05■□□□□ -0
Atf7Q8R0S1 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC15.05■□□□□ -0
Atf7Q8R0S1 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC15.05■□□□□ -0
Atf7Q8R0S1 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC15.05■□□□□ -0
Atf7Q8R0S1 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.05■□□□□ -0
Atf7Q8R0S1 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atf7Q8R0S1 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atf7Q8R0S1 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Atf7Q8R0S1 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Atf7Q8R0S1 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atf7Q8R0S1 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC15.05■□□□□ -0
Atf7Q8R0S1 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atf7Q8R0S1 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atf7Q8R0S1 Gm27196-201ENSMUST00000184787 2582 ntBASIC15.04■□□□□ -0
Atf7Q8R0S1 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atf7Q8R0S1 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atf7Q8R0S1 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atf7Q8R0S1 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Atf7Q8R0S1 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atf7Q8R0S1 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC15.04■□□□□ -0
Atf7Q8R0S1 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC15.04■□□□□ -0
Atf7Q8R0S1 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Atf7Q8R0S1 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Atf7Q8R0S1 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atf7Q8R0S1 Gm7553-201ENSMUST00000185805 1426 ntBASIC15.04■□□□□ -0
Atf7Q8R0S1 AC114008.2-201ENSMUST00000227699 1347 ntBASIC15.04■□□□□ -0
Atf7Q8R0S1 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.04■□□□□ -0
Atf7Q8R0S1 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC15.04■□□□□ -0
Atf7Q8R0S1 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Atf7Q8R0S1 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Atf7Q8R0S1 Gm15703-201ENSMUST00000120250 880 ntBASIC15.04■□□□□ -0
Atf7Q8R0S1 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.04■□□□□ -0
Atf7Q8R0S1 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC15.04■□□□□ -0
Atf7Q8R0S1 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC15.04■□□□□ -0
Atf7Q8R0S1 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC15.04■□□□□ -0
Atf7Q8R0S1 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC15.04■□□□□ -0
Atf7Q8R0S1 Gm10371-202ENSMUST00000228010 1081 ntBASIC15.04■□□□□ -0
Atf7Q8R0S1 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atf7Q8R0S1 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
Atf7Q8R0S1 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms