Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sf3a1Q8K4Z5 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sf3a1Q8K4Z5 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sf3a1Q8K4Z5 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sf3a1Q8K4Z5 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sf3a1Q8K4Z5 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.65■□□□□ 0.1
Sf3a1Q8K4Z5 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sf3a1Q8K4Z5 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sf3a1Q8K4Z5 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sf3a1Q8K4Z5 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sf3a1Q8K4Z5 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sf3a1Q8K4Z5 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC15.65■□□□□ 0.1
Sf3a1Q8K4Z5 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sf3a1Q8K4Z5 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Sf3a1Q8K4Z5 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Sf3a1Q8K4Z5 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sf3a1Q8K4Z5 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sf3a1Q8K4Z5 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sf3a1Q8K4Z5 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC15.65■□□□□ 0.1
Sf3a1Q8K4Z5 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sf3a1Q8K4Z5 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Sf3a1Q8K4Z5 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sf3a1Q8K4Z5 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Sf3a1Q8K4Z5 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Gm22018-201ENSMUST00000104357 131 ntBASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Gm12742-201ENSMUST00000117326 410 ntBASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Sf3a1Q8K4Z5 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sf3a1Q8K4Z5 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Sf3a1Q8K4Z5 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sf3a1Q8K4Z5 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sf3a1Q8K4Z5 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Sf3a1Q8K4Z5 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sf3a1Q8K4Z5 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sf3a1Q8K4Z5 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
Sf3a1Q8K4Z5 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sf3a1Q8K4Z5 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sf3a1Q8K4Z5 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sf3a1Q8K4Z5 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sf3a1Q8K4Z5 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.63■□□□□ 0.09
Sf3a1Q8K4Z5 Gm8062-201ENSMUST00000139696 444 ntBASIC15.63■□□□□ 0.09
Sf3a1Q8K4Z5 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC15.63■□□□□ 0.09
Sf3a1Q8K4Z5 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC15.63■□□□□ 0.09
Sf3a1Q8K4Z5 Gm7809-201ENSMUST00000153199 742 ntBASIC15.63■□□□□ 0.09
Sf3a1Q8K4Z5 Gm16379-201ENSMUST00000161469 348 ntBASIC15.63■□□□□ 0.09
Sf3a1Q8K4Z5 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sf3a1Q8K4Z5 Gm8762-201ENSMUST00000193486 339 ntBASIC15.63■□□□□ 0.09
Sf3a1Q8K4Z5 Gm37008-201ENSMUST00000195712 319 ntBASIC15.63■□□□□ 0.09
Sf3a1Q8K4Z5 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sf3a1Q8K4Z5 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sf3a1Q8K4Z5 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sf3a1Q8K4Z5 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sf3a1Q8K4Z5 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC15.63■□□□□ 0.09
Sf3a1Q8K4Z5 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Sf3a1Q8K4Z5 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sf3a1Q8K4Z5 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Sf3a1Q8K4Z5 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sf3a1Q8K4Z5 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sf3a1Q8K4Z5 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 Gm5422-201ENSMUST00000050717 2721 ntBASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms