Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Gm11425-201ENSMUST00000119608 498 ntBASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Mir1982-201ENSMUST00000157368 74 ntBASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Gm7029-201ENSMUST00000173226 450 ntBASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Gm27682-201ENSMUST00000183930 110 ntBASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Gm27731-201ENSMUST00000185192 107 ntBASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Gm18062-201ENSMUST00000208020 547 ntBASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Gm18055-201ENSMUST00000208254 547 ntBASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Gm40466-201ENSMUST00000212174 422 ntBASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Gm9396-201ENSMUST00000076703 567 ntBASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfwd3Q8CIK8 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 Gm1335-201ENSMUST00000121653 386 ntBASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfwd3Q8CIK8 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.02□□□□□ -0.48
Rfwd3Q8CIK8 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.02□□□□□ -0.48
Rfwd3Q8CIK8 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rfwd3Q8CIK8 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rfwd3Q8CIK8 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rfwd3Q8CIK8 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rfwd3Q8CIK8 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rfwd3Q8CIK8 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Rfwd3Q8CIK8 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rfwd3Q8CIK8 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rfwd3Q8CIK8 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rfwd3Q8CIK8 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rfwd3Q8CIK8 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Rfwd3Q8CIK8 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rfwd3Q8CIK8 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.02□□□□□ -0.48
Rfwd3Q8CIK8 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms