Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Gm45643-201ENSMUST00000211364 1484 ntBASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Gm12314-201ENSMUST00000118104 538 ntBASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Gm13665-201ENSMUST00000120830 528 ntBASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 AC159747.1-201ENSMUST00000219903 265 ntBASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 AC113031.8-201ENSMUST00000227856 631 ntBASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip3Q8CHD8 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip3Q8CHD8 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip3Q8CHD8 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip3Q8CHD8 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip3Q8CHD8 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip3Q8CHD8 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC16.5■□□□□ 0.23
Rab11fip3Q8CHD8 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip3Q8CHD8 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip3Q8CHD8 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Rab11fip3Q8CHD8 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rab11fip3Q8CHD8 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rab11fip3Q8CHD8 Gm14999-201ENSMUST00000121039 624 ntBASIC16.5■□□□□ 0.23
Rab11fip3Q8CHD8 Gm13570-201ENSMUST00000140763 309 ntBASIC16.5■□□□□ 0.23
Rab11fip3Q8CHD8 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC16.5■□□□□ 0.23
Rab11fip3Q8CHD8 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rab11fip3Q8CHD8 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC16.5■□□□□ 0.23
Rab11fip3Q8CHD8 AC161537.1-201ENSMUST00000226199 1015 ntBASIC16.5■□□□□ 0.23
Rab11fip3Q8CHD8 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip3Q8CHD8 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rab11fip3Q8CHD8 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip3Q8CHD8 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip3Q8CHD8 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip3Q8CHD8 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip3Q8CHD8 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip3Q8CHD8 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Rab11fip3Q8CHD8 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip3Q8CHD8 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rab11fip3Q8CHD8 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC16.49■□□□□ 0.23
Rab11fip3Q8CHD8 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab11fip3Q8CHD8 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rab11fip3Q8CHD8 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC16.49■□□□□ 0.23
Rab11fip3Q8CHD8 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rab11fip3Q8CHD8 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab11fip3Q8CHD8 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab11fip3Q8CHD8 Gm13315-201ENSMUST00000120376 991 ntBASIC16.49■□□□□ 0.23
Rab11fip3Q8CHD8 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Rab11fip3Q8CHD8 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC16.49■□□□□ 0.23
Rab11fip3Q8CHD8 AA914427-201ENSMUST00000193194 1166 ntBASIC16.49■□□□□ 0.23
Rab11fip3Q8CHD8 Gm5869-201ENSMUST00000200248 1257 ntBASIC16.49■□□□□ 0.23
Rab11fip3Q8CHD8 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC16.49■□□□□ 0.23
Rab11fip3Q8CHD8 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rab11fip3Q8CHD8 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC16.49■□□□□ 0.23
Rab11fip3Q8CHD8 Gm8712-201ENSMUST00000221090 701 ntBASIC16.49■□□□□ 0.23
Rab11fip3Q8CHD8 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab11fip3Q8CHD8 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab11fip3Q8CHD8 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Rab11fip3Q8CHD8 Gm10076-201ENSMUST00000073238 384 ntBASIC16.49■□□□□ 0.23
Rab11fip3Q8CHD8 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Rab11fip3Q8CHD8 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab11fip3Q8CHD8 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rab11fip3Q8CHD8 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Rab11fip3Q8CHD8 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab11fip3Q8CHD8 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab11fip3Q8CHD8 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rab11fip3Q8CHD8 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab11fip3Q8CHD8 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC16.48■□□□□ 0.23
Rab11fip3Q8CHD8 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab11fip3Q8CHD8 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Rab11fip3Q8CHD8 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab11fip3Q8CHD8 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab11fip3Q8CHD8 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab11fip3Q8CHD8 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Rab11fip3Q8CHD8 AC154222.2-201ENSMUST00000225848 607 ntBASIC16.48■□□□□ 0.23
Rab11fip3Q8CHD8 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rab11fip3Q8CHD8 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab11fip3Q8CHD8 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Rab11fip3Q8CHD8 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab11fip3Q8CHD8 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms