Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Gm43868-201ENSMUST00000205187 2114 ntBASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Gm11803-201ENSMUST00000119966 444 ntBASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Gm11918-201ENSMUST00000121660 179 ntBASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Gm37922-201ENSMUST00000195596 455 ntBASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Gm10012-201ENSMUST00000078252 192 ntBASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc38Q8CDN8 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Gm8810-201ENSMUST00000172895 754 ntBASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Mir339-201ENSMUST00000083659 96 ntBASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc38Q8CDN8 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc38Q8CDN8 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc38Q8CDN8 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc38Q8CDN8 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.21□□□□□ -0.13
Ccdc38Q8CDN8 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc38Q8CDN8 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc38Q8CDN8 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc38Q8CDN8 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ccdc38Q8CDN8 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.21□□□□□ -0.13
Ccdc38Q8CDN8 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.21□□□□□ -0.13
Ccdc38Q8CDN8 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc38Q8CDN8 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.21□□□□□ -0.13
Ccdc38Q8CDN8 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.21□□□□□ -0.13
Ccdc38Q8CDN8 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.21□□□□□ -0.13
Ccdc38Q8CDN8 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc38Q8CDN8 Gm6745-201ENSMUST00000199216 526 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms