Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Gm12485-201ENSMUST00000119641 291 ntBASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Gm11918-201ENSMUST00000121660 179 ntBASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.44□□□□□ -0.58
Rft1Q8C3B8 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
Rft1Q8C3B8 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Gm26464-201ENSMUST00000157094 305 ntBASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.43□□□□□ -0.58
Rft1Q8C3B8 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.43□□□□□ -0.58
Rft1Q8C3B8 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Gm12138-201ENSMUST00000122180 951 ntBASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Gm15376-201ENSMUST00000122258 783 ntBASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms