Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp47Q8BY87 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Usp47Q8BY87 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp47Q8BY87 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp47Q8BY87 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC17.94■□□□□ 0.46
Usp47Q8BY87 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp47Q8BY87 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp47Q8BY87 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp47Q8BY87 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Usp47Q8BY87 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp47Q8BY87 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp47Q8BY87 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp47Q8BY87 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp47Q8BY87 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Usp47Q8BY87 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Usp47Q8BY87 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp47Q8BY87 Gm11930-201ENSMUST00000117788 190 ntBASIC17.93■□□□□ 0.46
Usp47Q8BY87 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Usp47Q8BY87 Gm4959-201ENSMUST00000197271 1044 ntBASIC17.93■□□□□ 0.46
Usp47Q8BY87 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC17.93■□□□□ 0.46
Usp47Q8BY87 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC17.93■□□□□ 0.46
Usp47Q8BY87 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp47Q8BY87 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp47Q8BY87 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Usp47Q8BY87 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Usp47Q8BY87 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp47Q8BY87 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Usp47Q8BY87 Gm5884-201ENSMUST00000036712 1479 ntBASIC17.93■□□□□ 0.46
Usp47Q8BY87 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp47Q8BY87 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Usp47Q8BY87 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp47Q8BY87 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp47Q8BY87 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Usp47Q8BY87 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp47Q8BY87 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp47Q8BY87 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp47Q8BY87 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp47Q8BY87 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp47Q8BY87 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp47Q8BY87 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Usp47Q8BY87 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Usp47Q8BY87 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Usp47Q8BY87 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Usp47Q8BY87 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Usp47Q8BY87 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Usp47Q8BY87 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Usp47Q8BY87 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp47Q8BY87 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Usp47Q8BY87 Gm24830-201ENSMUST00000102024 166 ntBASIC17.92■□□□□ 0.46
Usp47Q8BY87 Gm14109-201ENSMUST00000118814 309 ntBASIC17.92■□□□□ 0.46
Usp47Q8BY87 Gm12715-201ENSMUST00000121430 1128 ntBASIC17.92■□□□□ 0.46
Usp47Q8BY87 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Usp47Q8BY87 Gm25890-201ENSMUST00000177643 165 ntBASIC17.92■□□□□ 0.46
Usp47Q8BY87 Rnu1b2-201ENSMUST00000178073 165 ntBASIC17.92■□□□□ 0.46
Usp47Q8BY87 Rnu1b1-201ENSMUST00000178250 165 ntBASIC17.92■□□□□ 0.46
Usp47Q8BY87 Gm22614-201ENSMUST00000178300 165 ntBASIC17.92■□□□□ 0.46
Usp47Q8BY87 Gm9022-201ENSMUST00000182482 992 ntBASIC17.92■□□□□ 0.46
Usp47Q8BY87 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC17.92■□□□□ 0.46
Usp47Q8BY87 AC169036.1-201ENSMUST00000227994 296 ntBASIC17.92■□□□□ 0.46
Usp47Q8BY87 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp47Q8BY87 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp47Q8BY87 Gm22042-201ENSMUST00000082989 165 ntBASIC17.92■□□□□ 0.46
Usp47Q8BY87 Gm26232-201ENSMUST00000083360 166 ntBASIC17.92■□□□□ 0.46
Usp47Q8BY87 Gm24136-201ENSMUST00000083374 165 ntBASIC17.92■□□□□ 0.46
Usp47Q8BY87 Rnu1b6-201ENSMUST00000083839 166 ntBASIC17.92■□□□□ 0.46
Usp47Q8BY87 Gm26110-201ENSMUST00000083971 165 ntBASIC17.92■□□□□ 0.46
Usp47Q8BY87 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp47Q8BY87 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC17.92■□□□□ 0.46
Usp47Q8BY87 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp47Q8BY87 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Usp47Q8BY87 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC17.92■□□□□ 0.46
Usp47Q8BY87 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC17.92■□□□□ 0.46
Usp47Q8BY87 Gm6015-201ENSMUST00000217493 1586 ntBASIC17.92■□□□□ 0.46
Usp47Q8BY87 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp47Q8BY87 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Usp47Q8BY87 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Usp47Q8BY87 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp47Q8BY87 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp47Q8BY87 AC116503.1-201ENSMUST00000215445 2192 ntBASIC17.92■□□□□ 0.46
Usp47Q8BY87 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC17.91■□□□□ 0.46
Usp47Q8BY87 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC17.91■□□□□ 0.46
Usp47Q8BY87 Gm25668-201ENSMUST00000157700 129 ntBASIC17.91■□□□□ 0.46
Usp47Q8BY87 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Usp47Q8BY87 Gm28882-201ENSMUST00000185504 314 ntBASIC17.91■□□□□ 0.46
Usp47Q8BY87 Gm3096-201ENSMUST00000185770 364 ntBASIC17.91■□□□□ 0.46
Usp47Q8BY87 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp47Q8BY87 Gm18304-201ENSMUST00000189162 546 ntBASIC17.91■□□□□ 0.46
Usp47Q8BY87 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC17.91■□□□□ 0.46
Usp47Q8BY87 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Usp47Q8BY87 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp47Q8BY87 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Usp47Q8BY87 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp47Q8BY87 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp47Q8BY87 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Usp47Q8BY87 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp47Q8BY87 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp47Q8BY87 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC17.91■□□□□ 0.46
Usp47Q8BY87 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp47Q8BY87 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp47Q8BY87 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms