Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scfd1Q8BRF7 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scfd1Q8BRF7 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Grk6-205ENSMUST00000224653 2976 ntBASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Gm14130-201ENSMUST00000118417 987 ntBASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Gm14832-201ENSMUST00000121289 322 ntBASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Gm14017-201ENSMUST00000121934 386 ntBASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Gm24845-201ENSMUST00000158034 109 ntBASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Gm28882-201ENSMUST00000185504 314 ntBASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scfd1Q8BRF7 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Rmrp-201ENSMUST00000157463 271 ntBASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Gm5363-201ENSMUST00000211927 938 ntBASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Gm10312-201ENSMUST00000078515 489 ntBASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scfd1Q8BRF7 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scfd1Q8BRF7 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scfd1Q8BRF7 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scfd1Q8BRF7 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scfd1Q8BRF7 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scfd1Q8BRF7 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scfd1Q8BRF7 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scfd1Q8BRF7 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scfd1Q8BRF7 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scfd1Q8BRF7 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms