Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Rd3Q8BRE0 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Rd3Q8BRE0 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rd3Q8BRE0 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Rd3Q8BRE0 Gm12058-201ENSMUST00000118614 437 ntBASIC13.55□□□□□ -0.24
Rd3Q8BRE0 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Rd3Q8BRE0 Gm13570-201ENSMUST00000140763 309 ntBASIC13.55□□□□□ -0.24
Rd3Q8BRE0 Gm25043-201ENSMUST00000158604 212 ntBASIC13.55□□□□□ -0.24
Rd3Q8BRE0 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rd3Q8BRE0 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.55□□□□□ -0.24
Rd3Q8BRE0 AA914427-201ENSMUST00000193194 1166 ntBASIC13.55□□□□□ -0.24
Rd3Q8BRE0 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.55□□□□□ -0.24
Rd3Q8BRE0 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.55□□□□□ -0.24
Rd3Q8BRE0 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.55□□□□□ -0.24
Rd3Q8BRE0 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.55□□□□□ -0.24
Rd3Q8BRE0 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rd3Q8BRE0 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rd3Q8BRE0 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rd3Q8BRE0 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rd3Q8BRE0 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rd3Q8BRE0 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rd3Q8BRE0 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.55□□□□□ -0.24
Rd3Q8BRE0 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rd3Q8BRE0 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rd3Q8BRE0 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rd3Q8BRE0 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rd3Q8BRE0 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Rd3Q8BRE0 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rd3Q8BRE0 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Mir339-201ENSMUST00000083659 96 ntBASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rd3Q8BRE0 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Gm14109-201ENSMUST00000118814 309 ntBASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Gm37201-201ENSMUST00000191845 523 ntBASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Gm44262-201ENSMUST00000204969 372 ntBASIC13.53□□□□□ -0.24
Rd3Q8BRE0 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms