Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Rprl1-201ENSMUST00000158050 327 ntBASIC17.82■□□□□ 0.44
Usp54Q8BL06 Ighv1-48-201ENSMUST00000191795 294 ntBASIC17.82■□□□□ 0.44
Usp54Q8BL06 Gm42629-201ENSMUST00000199063 1102 ntBASIC17.82■□□□□ 0.44
Usp54Q8BL06 CT485607.1-201ENSMUST00000216100 85 ntBASIC17.82■□□□□ 0.44
Usp54Q8BL06 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC17.82■□□□□ 0.44
Usp54Q8BL06 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp54Q8BL06 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp54Q8BL06 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC17.82■□□□□ 0.44
Usp54Q8BL06 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp54Q8BL06 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Usp54Q8BL06 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp54Q8BL06 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Usp54Q8BL06 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Usp54Q8BL06 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp54Q8BL06 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC17.81■□□□□ 0.44
Usp54Q8BL06 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp54Q8BL06 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp54Q8BL06 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp54Q8BL06 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp54Q8BL06 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp54Q8BL06 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp54Q8BL06 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp54Q8BL06 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp54Q8BL06 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC17.81■□□□□ 0.44
Usp54Q8BL06 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp54Q8BL06 Gm5419-201ENSMUST00000119301 527 ntBASIC17.81■□□□□ 0.44
Usp54Q8BL06 Gm12899-201ENSMUST00000120565 551 ntBASIC17.81■□□□□ 0.44
Usp54Q8BL06 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC17.81■□□□□ 0.44
Usp54Q8BL06 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp54Q8BL06 Mir8115-201ENSMUST00000184992 119 ntBASIC17.81■□□□□ 0.44
Usp54Q8BL06 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC17.81■□□□□ 0.44
Usp54Q8BL06 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC17.81■□□□□ 0.44
Usp54Q8BL06 Gm38228-201ENSMUST00000193169 1293 ntBASIC17.81■□□□□ 0.44
Usp54Q8BL06 Gm45398-201ENSMUST00000210561 165 ntBASIC17.81■□□□□ 0.44
Usp54Q8BL06 Gm9797-202ENSMUST00000218003 294 ntBASIC17.81■□□□□ 0.44
Usp54Q8BL06 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp54Q8BL06 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp54Q8BL06 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp54Q8BL06 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp54Q8BL06 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC17.81■□□□□ 0.44
Usp54Q8BL06 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp54Q8BL06 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp54Q8BL06 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp54Q8BL06 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp54Q8BL06 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp54Q8BL06 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp54Q8BL06 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Usp54Q8BL06 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Usp54Q8BL06 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp54Q8BL06 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Usp54Q8BL06 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp54Q8BL06 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC17.8■□□□□ 0.44
Usp54Q8BL06 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Usp54Q8BL06 Gm43058-201ENSMUST00000197645 625 ntBASIC17.8■□□□□ 0.44
Usp54Q8BL06 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp54Q8BL06 AC171241.1-201ENSMUST00000228144 1166 ntBASIC17.8■□□□□ 0.44
Usp54Q8BL06 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp54Q8BL06 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp54Q8BL06 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp54Q8BL06 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Usp54Q8BL06 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp54Q8BL06 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC17.79■□□□□ 0.44
Usp54Q8BL06 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Usp54Q8BL06 Gm11511-201ENSMUST00000118146 540 ntBASIC17.79■□□□□ 0.44
Usp54Q8BL06 Gm38210-201ENSMUST00000191944 809 ntBASIC17.79■□□□□ 0.44
Usp54Q8BL06 Gm17831-201ENSMUST00000205579 900 ntBASIC17.79■□□□□ 0.44
Usp54Q8BL06 CT030637.1-201ENSMUST00000228016 669 ntBASIC17.79■□□□□ 0.44
Usp54Q8BL06 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp54Q8BL06 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp54Q8BL06 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp54Q8BL06 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp54Q8BL06 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp54Q8BL06 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Usp54Q8BL06 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Usp54Q8BL06 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp54Q8BL06 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp54Q8BL06 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp54Q8BL06 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Usp54Q8BL06 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp54Q8BL06 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Usp54Q8BL06 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp54Q8BL06 Gm14247-201ENSMUST00000120950 237 ntBASIC17.79■□□□□ 0.44
Usp54Q8BL06 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC17.79■□□□□ 0.44
Usp54Q8BL06 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC17.79■□□□□ 0.44
Usp54Q8BL06 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC17.79■□□□□ 0.44
Usp54Q8BL06 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Usp54Q8BL06 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Usp54Q8BL06 Gm8956-201ENSMUST00000203939 825 ntBASIC17.79■□□□□ 0.44
Usp54Q8BL06 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC17.79■□□□□ 0.44
Usp54Q8BL06 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Usp54Q8BL06 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Usp54Q8BL06 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Usp54Q8BL06 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Usp54Q8BL06 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp54Q8BL06 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp54Q8BL06 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp54Q8BL06 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp54Q8BL06 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp54Q8BL06 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC17.78■□□□□ 0.44
Usp54Q8BL06 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms