Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp2bQ8BJF9 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.1□□□□□ -0.31
Chmp2bQ8BJF9 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp2bQ8BJF9 Gm15920-201ENSMUST00000118998 402 ntBASIC13.1□□□□□ -0.31
Chmp2bQ8BJF9 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp2bQ8BJF9 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.1□□□□□ -0.31
Chmp2bQ8BJF9 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.1□□□□□ -0.31
Chmp2bQ8BJF9 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.1□□□□□ -0.31
Chmp2bQ8BJF9 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Chmp2bQ8BJF9 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Chmp2bQ8BJF9 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.1□□□□□ -0.31
Chmp2bQ8BJF9 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Chmp2bQ8BJF9 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.1□□□□□ -0.31
Chmp2bQ8BJF9 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.1□□□□□ -0.31
Chmp2bQ8BJF9 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Gm28631-201ENSMUST00000190740 334 ntBASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2bQ8BJF9 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Chmp2bQ8BJF9 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Chmp2bQ8BJF9 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Chmp2bQ8BJF9 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.08□□□□□ -0.31
Chmp2bQ8BJF9 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Chmp2bQ8BJF9 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Chmp2bQ8BJF9 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Chmp2bQ8BJF9 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Chmp2bQ8BJF9 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2bQ8BJF9 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2bQ8BJF9 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2bQ8BJF9 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.08□□□□□ -0.32
Chmp2bQ8BJF9 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2bQ8BJF9 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2bQ8BJF9 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Chmp2bQ8BJF9 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.08□□□□□ -0.32
Chmp2bQ8BJF9 Gm15429-201ENSMUST00000151268 798 ntBASIC13.08□□□□□ -0.32
Chmp2bQ8BJF9 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2bQ8BJF9 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Chmp2bQ8BJF9 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2bQ8BJF9 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2bQ8BJF9 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Chmp2bQ8BJF9 Gm44069-201ENSMUST00000204898 506 ntBASIC13.08□□□□□ -0.32
Chmp2bQ8BJF9 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.08□□□□□ -0.32
Chmp2bQ8BJF9 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2bQ8BJF9 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2bQ8BJF9 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2bQ8BJF9 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2bQ8BJF9 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2bQ8BJF9 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2bQ8BJF9 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2bQ8BJF9 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2bQ8BJF9 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2bQ8BJF9 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2bQ8BJF9 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2bQ8BJF9 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2bQ8BJF9 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms