Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn3Q8BHH8 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Proscos-202ENSMUST00000178990 666 ntBASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Gm37922-201ENSMUST00000195596 455 ntBASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Gm8598-201ENSMUST00000221184 836 ntBASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn3Q8BHH8 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Gm6458-201ENSMUST00000211573 635 ntBASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms