Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Samm50Q8BGH2 Gm9396-201ENSMUST00000076703 567 ntBASIC15□□□□□ -0.01
Samm50Q8BGH2 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Samm50Q8BGH2 Gm6091-201ENSMUST00000098307 165 ntBASIC15□□□□□ -0.01
Samm50Q8BGH2 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Samm50Q8BGH2 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC15□□□□□ -0.01
Samm50Q8BGH2 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Samm50Q8BGH2 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Samm50Q8BGH2 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Samm50Q8BGH2 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Samm50Q8BGH2 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Samm50Q8BGH2 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Samm50Q8BGH2 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Samm50Q8BGH2 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Samm50Q8BGH2 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Samm50Q8BGH2 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.99□□□□□ -0.01
Samm50Q8BGH2 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Samm50Q8BGH2 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Samm50Q8BGH2 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Samm50Q8BGH2 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Samm50Q8BGH2 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.99□□□□□ -0.01
Samm50Q8BGH2 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.99□□□□□ -0.01
Samm50Q8BGH2 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Samm50Q8BGH2 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Samm50Q8BGH2 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.99□□□□□ -0.01
Samm50Q8BGH2 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.99□□□□□ -0.01
Samm50Q8BGH2 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Samm50Q8BGH2 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.99□□□□□ -0.01
Samm50Q8BGH2 Gm7561-201ENSMUST00000211203 886 ntBASIC14.99□□□□□ -0.01
Samm50Q8BGH2 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.99□□□□□ -0.01
Samm50Q8BGH2 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.99□□□□□ -0.01
Samm50Q8BGH2 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Samm50Q8BGH2 Gm10012-201ENSMUST00000078252 192 ntBASIC14.99□□□□□ -0.01
Samm50Q8BGH2 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Samm50Q8BGH2 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Samm50Q8BGH2 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Samm50Q8BGH2 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Samm50Q8BGH2 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.99□□□□□ -0.01
Samm50Q8BGH2 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Samm50Q8BGH2 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Samm50Q8BGH2 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Samm50Q8BGH2 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Samm50Q8BGH2 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Samm50Q8BGH2 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Samm50Q8BGH2 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Samm50Q8BGH2 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Samm50Q8BGH2 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Samm50Q8BGH2 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Samm50Q8BGH2 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Samm50Q8BGH2 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Samm50Q8BGH2 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Samm50Q8BGH2 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Samm50Q8BGH2 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Samm50Q8BGH2 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Samm50Q8BGH2 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.98□□□□□ -0.01
Samm50Q8BGH2 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Samm50Q8BGH2 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Samm50Q8BGH2 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Samm50Q8BGH2 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Samm50Q8BGH2 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Samm50Q8BGH2 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.98□□□□□ -0.01
Samm50Q8BGH2 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Samm50Q8BGH2 Gm11803-201ENSMUST00000119966 444 ntBASIC14.98□□□□□ -0.01
Samm50Q8BGH2 Gm8810-201ENSMUST00000172895 754 ntBASIC14.98□□□□□ -0.01
Samm50Q8BGH2 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Samm50Q8BGH2 Gm16372-201ENSMUST00000073088 450 ntBASIC14.98□□□□□ -0.01
Samm50Q8BGH2 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Samm50Q8BGH2 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Samm50Q8BGH2 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Samm50Q8BGH2 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.98□□□□□ -0.01
Samm50Q8BGH2 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Samm50Q8BGH2 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Samm50Q8BGH2 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.98□□□□□ -0.01
Samm50Q8BGH2 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Samm50Q8BGH2 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Samm50Q8BGH2 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.97□□□□□ -0.01
Samm50Q8BGH2 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Samm50Q8BGH2 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Samm50Q8BGH2 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Samm50Q8BGH2 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Samm50Q8BGH2 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Samm50Q8BGH2 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Samm50Q8BGH2 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Samm50Q8BGH2 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.97□□□□□ -0.01
Samm50Q8BGH2 Gm24644-201ENSMUST00000157114 139 ntBASIC14.97□□□□□ -0.01
Samm50Q8BGH2 Gm22331-201ENSMUST00000158066 136 ntBASIC14.97□□□□□ -0.01
Samm50Q8BGH2 Gm24196-201ENSMUST00000179161 110 ntBASIC14.97□□□□□ -0.01
Samm50Q8BGH2 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.97□□□□□ -0.01
Samm50Q8BGH2 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.97□□□□□ -0.01
Samm50Q8BGH2 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.97□□□□□ -0.01
Samm50Q8BGH2 Gm8598-201ENSMUST00000221184 836 ntBASIC14.97□□□□□ -0.01
Samm50Q8BGH2 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Samm50Q8BGH2 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Samm50Q8BGH2 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.97□□□□□ -0.01
Samm50Q8BGH2 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Samm50Q8BGH2 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Samm50Q8BGH2 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.97□□□□□ -0.01
Samm50Q8BGH2 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.96□□□□□ -0.01
Samm50Q8BGH2 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Samm50Q8BGH2 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms