Protein–RNA interactions for Protein: Q8BGA5

Krr1, KRR1 small subunit processome component homolog, mousemouse

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krr1Q8BGA5 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krr1Q8BGA5 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Krr1Q8BGA5 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krr1Q8BGA5 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Krr1Q8BGA5 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krr1Q8BGA5 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krr1Q8BGA5 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.14□□□□□ -0.47
Krr1Q8BGA5 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Krr1Q8BGA5 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.14□□□□□ -0.47
Krr1Q8BGA5 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Krr1Q8BGA5 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krr1Q8BGA5 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krr1Q8BGA5 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Krr1Q8BGA5 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Krr1Q8BGA5 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Gm38223-201ENSMUST00000194484 695 ntBASIC12.12□□□□□ -0.47
Krr1Q8BGA5 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krr1Q8BGA5 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Krr1Q8BGA5 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Krr1Q8BGA5 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms