Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.35□□□□□ -0.27
Srrm3Q80WV7 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Gm9630-201ENSMUST00000178304 885 ntBASIC13.35□□□□□ -0.27
Srrm3Q80WV7 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.35□□□□□ -0.27
Srrm3Q80WV7 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.35□□□□□ -0.27
Srrm3Q80WV7 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Gm5356-201ENSMUST00000093326 615 ntBASIC13.35□□□□□ -0.27
Srrm3Q80WV7 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Srrm3Q80WV7 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Gm16570-201ENSMUST00000161951 436 ntBASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Srrm3Q80WV7 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Srrm3Q80WV7 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.33□□□□□ -0.27
Srrm3Q80WV7 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Srrm3Q80WV7 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.33□□□□□ -0.27
Srrm3Q80WV7 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Srrm3Q80WV7 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Srrm3Q80WV7 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Srrm3Q80WV7 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Srrm3Q80WV7 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Srrm3Q80WV7 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Srrm3Q80WV7 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Srrm3Q80WV7 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Srrm3Q80WV7 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Srrm3Q80WV7 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Srrm3Q80WV7 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms