Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdh8Q7TSK3 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Gm26083-201ENSMUST00000157904 193 ntBASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Gm24548-201ENSMUST00000158650 108 ntBASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Gm19931-201ENSMUST00000198920 368 ntBASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh8Q7TSK3 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Mir7221-201ENSMUST00000184009 72 ntBASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Gm38241-201ENSMUST00000192641 898 ntBASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Gm5904-201ENSMUST00000210286 865 ntBASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms