Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ctdp1Q7TSG2 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ctdp1Q7TSG2 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ctdp1Q7TSG2 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Gm43094-201ENSMUST00000196549 921 ntBASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ctdp1Q7TSG2 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Gm12490-201ENSMUST00000120255 560 ntBASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Gm15376-201ENSMUST00000122258 783 ntBASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Gm7653-201ENSMUST00000214567 508 ntBASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Gm6180-201ENSMUST00000065243 498 ntBASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctdp1Q7TSG2 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctdp1Q7TSG2 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctdp1Q7TSG2 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctdp1Q7TSG2 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ctdp1Q7TSG2 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctdp1Q7TSG2 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ctdp1Q7TSG2 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctdp1Q7TSG2 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctdp1Q7TSG2 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctdp1Q7TSG2 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctdp1Q7TSG2 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctdp1Q7TSG2 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctdp1Q7TSG2 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctdp1Q7TSG2 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctdp1Q7TSG2 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ctdp1Q7TSG2 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ctdp1Q7TSG2 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.92□□□□□ -0.18
Ctdp1Q7TSG2 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ctdp1Q7TSG2 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctdp1Q7TSG2 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ctdp1Q7TSG2 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctdp1Q7TSG2 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctdp1Q7TSG2 Gm12341-201ENSMUST00000119724 503 ntBASIC13.92□□□□□ -0.18
Ctdp1Q7TSG2 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.92□□□□□ -0.18
Ctdp1Q7TSG2 Gm12091-201ENSMUST00000146791 830 ntBASIC13.92□□□□□ -0.18
Ctdp1Q7TSG2 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.92□□□□□ -0.18
Ctdp1Q7TSG2 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.92□□□□□ -0.18
Ctdp1Q7TSG2 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctdp1Q7TSG2 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms