Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox11Q7M6Y2 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox11Q7M6Y2 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox11Q7M6Y2 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sox11Q7M6Y2 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox11Q7M6Y2 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Sox11Q7M6Y2 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox11Q7M6Y2 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sox11Q7M6Y2 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Sox11Q7M6Y2 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Sox11Q7M6Y2 Gm15547-201ENSMUST00000122152 333 ntBASIC12.96□□□□□ -0.33
Sox11Q7M6Y2 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.96□□□□□ -0.33
Sox11Q7M6Y2 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.96□□□□□ -0.33
Sox11Q7M6Y2 Gm2546-201ENSMUST00000182630 991 ntBASIC12.96□□□□□ -0.33
Sox11Q7M6Y2 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.96□□□□□ -0.33
Sox11Q7M6Y2 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.96□□□□□ -0.33
Sox11Q7M6Y2 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox11Q7M6Y2 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox11Q7M6Y2 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox11Q7M6Y2 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox11Q7M6Y2 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sox11Q7M6Y2 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sox11Q7M6Y2 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox11Q7M6Y2 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Sox11Q7M6Y2 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.96□□□□□ -0.34
Sox11Q7M6Y2 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox11Q7M6Y2 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Sox11Q7M6Y2 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox11Q7M6Y2 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sox11Q7M6Y2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox11Q7M6Y2 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Gm22334-201ENSMUST00000158070 133 ntBASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Gm25732-201ENSMUST00000175168 60 ntBASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Mir6927-201ENSMUST00000184494 71 ntBASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Gm43378-201ENSMUST00000199336 582 ntBASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Gm6458-201ENSMUST00000211573 635 ntBASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.95□□□□□ -0.34
Sox11Q7M6Y2 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox11Q7M6Y2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox11Q7M6Y2 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox11Q7M6Y2 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox11Q7M6Y2 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox11Q7M6Y2 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox11Q7M6Y2 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox11Q7M6Y2 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.94□□□□□ -0.34
Sox11Q7M6Y2 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.94□□□□□ -0.34
Sox11Q7M6Y2 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox11Q7M6Y2 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox11Q7M6Y2 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox11Q7M6Y2 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Sox11Q7M6Y2 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.94□□□□□ -0.34
Sox11Q7M6Y2 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox11Q7M6Y2 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox11Q7M6Y2 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Sox11Q7M6Y2 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sox11Q7M6Y2 Gm14109-201ENSMUST00000118814 309 ntBASIC12.94□□□□□ -0.34
Sox11Q7M6Y2 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sox11Q7M6Y2 Gm26361-201ENSMUST00000158868 186 ntBASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms