Protein–RNA interactions for Protein: Q78WZ7

Twistnb, DNA-directed RNA polymerase I subunit RPA43, mousemouse

Known RBP Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TwistnbQ78WZ7 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TwistnbQ78WZ7 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TwistnbQ78WZ7 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TwistnbQ78WZ7 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TwistnbQ78WZ7 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13□□□□□ -0.33
TwistnbQ78WZ7 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13□□□□□ -0.33
TwistnbQ78WZ7 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13□□□□□ -0.33
TwistnbQ78WZ7 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TwistnbQ78WZ7 Gm2238-201ENSMUST00000192074 3669 ntBASIC13□□□□□ -0.33
TwistnbQ78WZ7 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TwistnbQ78WZ7 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13□□□□□ -0.33
TwistnbQ78WZ7 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
TwistnbQ78WZ7 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TwistnbQ78WZ7 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13□□□□□ -0.33
TwistnbQ78WZ7 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TwistnbQ78WZ7 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TwistnbQ78WZ7 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TwistnbQ78WZ7 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Gm4875-201ENSMUST00000118257 786 ntBASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Gm8000-201ENSMUST00000188378 592 ntBASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.99□□□□□ -0.33
TwistnbQ78WZ7 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 Gm27680-201ENSMUST00000184192 160 ntBASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 Gm6888-201ENSMUST00000221983 706 ntBASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TwistnbQ78WZ7 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TwistnbQ78WZ7 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TwistnbQ78WZ7 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TwistnbQ78WZ7 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TwistnbQ78WZ7 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TwistnbQ78WZ7 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TwistnbQ78WZ7 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TwistnbQ78WZ7 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TwistnbQ78WZ7 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TwistnbQ78WZ7 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.97□□□□□ -0.33
TwistnbQ78WZ7 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TwistnbQ78WZ7 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TwistnbQ78WZ7 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms