Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Vma21Q78T54 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC10.4□□□□□ -0.74
Vma21Q78T54 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Vma21Q78T54 AC154687.2-201ENSMUST00000223853 640 ntBASIC10.4□□□□□ -0.74
Vma21Q78T54 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vma21Q78T54 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vma21Q78T54 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Vma21Q78T54 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Vma21Q78T54 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC10.4□□□□□ -0.74
Vma21Q78T54 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vma21Q78T54 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vma21Q78T54 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Vma21Q78T54 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vma21Q78T54 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vma21Q78T54 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Vma21Q78T54 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Vma21Q78T54 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.75
Vma21Q78T54 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Vma21Q78T54 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Vma21Q78T54 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Vma21Q78T54 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.39□□□□□ -0.75
Vma21Q78T54 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10.39□□□□□ -0.75
Vma21Q78T54 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vma21Q78T54 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vma21Q78T54 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vma21Q78T54 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Vma21Q78T54 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vma21Q78T54 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vma21Q78T54 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Vma21Q78T54 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.39□□□□□ -0.75
Vma21Q78T54 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vma21Q78T54 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Vma21Q78T54 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vma21Q78T54 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Vma21Q78T54 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vma21Q78T54 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vma21Q78T54 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vma21Q78T54 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vma21Q78T54 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Vma21Q78T54 Mir686-201ENSMUST00000102174 109 ntBASIC10.39□□□□□ -0.75
Vma21Q78T54 Gm14350-201ENSMUST00000116642 640 ntBASIC10.39□□□□□ -0.75
Vma21Q78T54 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.39□□□□□ -0.75
Vma21Q78T54 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vma21Q78T54 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC10.39□□□□□ -0.75
Vma21Q78T54 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC10.39□□□□□ -0.75
Vma21Q78T54 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC10.39□□□□□ -0.75
Vma21Q78T54 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Vma21Q78T54 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Vma21Q78T54 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vma21Q78T54 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC10.39□□□□□ -0.75
Vma21Q78T54 Gm44069-201ENSMUST00000204898 506 ntBASIC10.39□□□□□ -0.75
Vma21Q78T54 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vma21Q78T54 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC10.39□□□□□ -0.75
Vma21Q78T54 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Vma21Q78T54 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vma21Q78T54 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Vma21Q78T54 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Vma21Q78T54 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vma21Q78T54 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Vma21Q78T54 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Vma21Q78T54 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vma21Q78T54 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Vma21Q78T54 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vma21Q78T54 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vma21Q78T54 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.39□□□□□ -0.75
Vma21Q78T54 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vma21Q78T54 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Vma21Q78T54 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vma21Q78T54 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vma21Q78T54 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Vma21Q78T54 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Vma21Q78T54 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Vma21Q78T54 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Vma21Q78T54 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Vma21Q78T54 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Vma21Q78T54 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Vma21Q78T54 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC10.38□□□□□ -0.75
Vma21Q78T54 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Vma21Q78T54 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Vma21Q78T54 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Vma21Q78T54 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.38□□□□□ -0.75
Vma21Q78T54 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Vma21Q78T54 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Vma21Q78T54 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Vma21Q78T54 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.38□□□□□ -0.75
Vma21Q78T54 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Vma21Q78T54 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.38□□□□□ -0.75
Vma21Q78T54 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Vma21Q78T54 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Vma21Q78T54 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Vma21Q78T54 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Vma21Q78T54 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Vma21Q78T54 Gm5687-201ENSMUST00000118252 640 ntBASIC10.38□□□□□ -0.75
Vma21Q78T54 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC10.38□□□□□ -0.75
Vma21Q78T54 Gm15429-201ENSMUST00000151268 798 ntBASIC10.38□□□□□ -0.75
Vma21Q78T54 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.38□□□□□ -0.75
Vma21Q78T54 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Vma21Q78T54 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC10.38□□□□□ -0.75
Vma21Q78T54 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Vma21Q78T54 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 662.2 ms