Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ubfd1Q78JW9 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Ubfd1Q78JW9 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Gm8018-201ENSMUST00000173536 789 ntBASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Gm4857-201ENSMUST00000192718 785 ntBASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Gm5950-201ENSMUST00000213337 772 ntBASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ubfd1Q78JW9 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Mir877-201ENSMUST00000104738 85 ntBASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Gm11531-201ENSMUST00000117614 555 ntBASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ubfd1Q78JW9 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ubfd1Q78JW9 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ubfd1Q78JW9 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ubfd1Q78JW9 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ubfd1Q78JW9 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ubfd1Q78JW9 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ubfd1Q78JW9 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ubfd1Q78JW9 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ubfd1Q78JW9 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Ubfd1Q78JW9 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.43□□□□□ -0.42
Ubfd1Q78JW9 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ubfd1Q78JW9 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ubfd1Q78JW9 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ubfd1Q78JW9 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ubfd1Q78JW9 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ubfd1Q78JW9 Gm13736-201ENSMUST00000119272 253 ntBASIC12.43□□□□□ -0.42
Ubfd1Q78JW9 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.43□□□□□ -0.42
Ubfd1Q78JW9 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.43□□□□□ -0.42
Ubfd1Q78JW9 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ubfd1Q78JW9 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.43□□□□□ -0.42
Ubfd1Q78JW9 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
Ubfd1Q78JW9 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms