Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc88cQ6VGS5 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc88cQ6VGS5 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc88cQ6VGS5 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc88cQ6VGS5 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc88cQ6VGS5 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc88cQ6VGS5 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc88cQ6VGS5 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc88cQ6VGS5 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Gm12314-201ENSMUST00000118104 538 ntBASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Gm2546-201ENSMUST00000182630 991 ntBASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Gm4857-201ENSMUST00000192718 785 ntBASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Gm38317-201ENSMUST00000195564 343 ntBASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Gm45186-201ENSMUST00000206874 478 ntBASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88cQ6VGS5 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88cQ6VGS5 Gm12012-201ENSMUST00000118857 1066 ntBASIC14.08□□□□□ -0.15
Ccdc88cQ6VGS5 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.08□□□□□ -0.15
Ccdc88cQ6VGS5 Gm45224-201ENSMUST00000208203 414 ntBASIC14.08□□□□□ -0.15
Ccdc88cQ6VGS5 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.08□□□□□ -0.15
Ccdc88cQ6VGS5 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc88cQ6VGS5 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc88cQ6VGS5 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Ccdc88cQ6VGS5 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.08□□□□□ -0.15
Ccdc88cQ6VGS5 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.08□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms