Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Timd4Q6U7R4 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Timd4Q6U7R4 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Timd4Q6U7R4 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Timd4Q6U7R4 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.9□□□□□ -0.5
Timd4Q6U7R4 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Timd4Q6U7R4 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Timd4Q6U7R4 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Timd4Q6U7R4 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Timd4Q6U7R4 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.89□□□□□ -0.51
Timd4Q6U7R4 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Gm45331-201ENSMUST00000209868 554 ntBASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Timd4Q6U7R4 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Gm13392-201ENSMUST00000117708 150 ntBASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Timd4Q6U7R4 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Timd4Q6U7R4 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Timd4Q6U7R4 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Timd4Q6U7R4 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Timd4Q6U7R4 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.87□□□□□ -0.51
Timd4Q6U7R4 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Timd4Q6U7R4 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms