Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.8□□□□□ -0.04
Nup98Q6PFD9 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.8□□□□□ -0.04
Nup98Q6PFD9 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup98Q6PFD9 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup98Q6PFD9 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.79□□□□□ -0.04
Nup98Q6PFD9 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Nup98Q6PFD9 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.79□□□□□ -0.04
Nup98Q6PFD9 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup98Q6PFD9 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup98Q6PFD9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup98Q6PFD9 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Nup98Q6PFD9 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup98Q6PFD9 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup98Q6PFD9 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup98Q6PFD9 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup98Q6PFD9 Gm20426-201ENSMUST00000173657 440 ntBASIC14.79□□□□□ -0.04
Nup98Q6PFD9 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nup98Q6PFD9 Gm45909-201ENSMUST00000212413 1031 ntBASIC14.79□□□□□ -0.04
Nup98Q6PFD9 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup98Q6PFD9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup98Q6PFD9 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.79□□□□□ -0.04
Nup98Q6PFD9 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup98Q6PFD9 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nup98Q6PFD9 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Nup98Q6PFD9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup98Q6PFD9 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup98Q6PFD9 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.79□□□□□ -0.04
Nup98Q6PFD9 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nup98Q6PFD9 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nup98Q6PFD9 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup98Q6PFD9 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.78□□□□□ -0.04
Nup98Q6PFD9 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.78□□□□□ -0.04
Nup98Q6PFD9 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
Nup98Q6PFD9 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup98Q6PFD9 Gm11941-201ENSMUST00000119904 610 ntBASIC14.78□□□□□ -0.04
Nup98Q6PFD9 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nup98Q6PFD9 CT009713.8-201ENSMUST00000225448 560 ntBASIC14.78□□□□□ -0.04
Nup98Q6PFD9 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup98Q6PFD9 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup98Q6PFD9 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Nup98Q6PFD9 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nup98Q6PFD9 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup98Q6PFD9 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup98Q6PFD9 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nup98Q6PFD9 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup98Q6PFD9 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nup98Q6PFD9 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nup98Q6PFD9 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup98Q6PFD9 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nup98Q6PFD9 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup98Q6PFD9 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Nup98Q6PFD9 Gm11511-201ENSMUST00000118146 540 ntBASIC14.78□□□□□ -0.04
Nup98Q6PFD9 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.78□□□□□ -0.04
Nup98Q6PFD9 Gm12164-201ENSMUST00000121695 551 ntBASIC14.78□□□□□ -0.04
Nup98Q6PFD9 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC14.78□□□□□ -0.04
Nup98Q6PFD9 Cd63-ps-202ENSMUST00000154992 717 ntBASIC14.78□□□□□ -0.04
Nup98Q6PFD9 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC14.78□□□□□ -0.04
Nup98Q6PFD9 Mir6546-201ENSMUST00000184460 62 ntBASIC14.78□□□□□ -0.04
Nup98Q6PFD9 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup98Q6PFD9 CT009718.3-201ENSMUST00000221116 367 ntBASIC14.78□□□□□ -0.04
Nup98Q6PFD9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.78□□□□□ -0.04
Nup98Q6PFD9 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nup98Q6PFD9 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nup98Q6PFD9 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nup98Q6PFD9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nup98Q6PFD9 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Nup98Q6PFD9 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nup98Q6PFD9 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.77□□□□□ -0.04
Nup98Q6PFD9 Gm43081-201ENSMUST00000199082 1380 ntBASIC14.77□□□□□ -0.04
Nup98Q6PFD9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nup98Q6PFD9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup98Q6PFD9 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Nup98Q6PFD9 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Nup98Q6PFD9 Gm11509-201ENSMUST00000117358 325 ntBASIC14.77□□□□□ -0.05
Nup98Q6PFD9 Gm25881-201ENSMUST00000157783 103 ntBASIC14.77□□□□□ -0.05
Nup98Q6PFD9 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC14.77□□□□□ -0.05
Nup98Q6PFD9 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.77□□□□□ -0.05
Nup98Q6PFD9 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC14.77□□□□□ -0.05
Nup98Q6PFD9 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nup98Q6PFD9 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup98Q6PFD9 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup98Q6PFD9 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup98Q6PFD9 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup98Q6PFD9 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.77□□□□□ -0.05
Nup98Q6PFD9 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup98Q6PFD9 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup98Q6PFD9 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup98Q6PFD9 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup98Q6PFD9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Nup98Q6PFD9 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup98Q6PFD9 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nup98Q6PFD9 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup98Q6PFD9 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup98Q6PFD9 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Nup98Q6PFD9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Nup98Q6PFD9 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup98Q6PFD9 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nup98Q6PFD9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nup98Q6PFD9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Nup98Q6PFD9 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms