Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Ighv4-2-201ENSMUST00000192975 362 ntBASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chd4Q6PDQ2 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chd4Q6PDQ2 Gm8038-201ENSMUST00000164674 2044 ntBASIC16.36■□□□□ 0.21
Chd4Q6PDQ2 Gm6198-201ENSMUST00000191337 2929 ntBASIC16.36■□□□□ 0.21
Chd4Q6PDQ2 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC16.36■□□□□ 0.21
Chd4Q6PDQ2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chd4Q6PDQ2 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chd4Q6PDQ2 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chd4Q6PDQ2 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Chd4Q6PDQ2 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chd4Q6PDQ2 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chd4Q6PDQ2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chd4Q6PDQ2 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chd4Q6PDQ2 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC16.36■□□□□ 0.21
Chd4Q6PDQ2 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chd4Q6PDQ2 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC16.36■□□□□ 0.21
Chd4Q6PDQ2 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chd4Q6PDQ2 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
Chd4Q6PDQ2 Gm28071-201ENSMUST00000190355 478 ntBASIC16.36■□□□□ 0.21
Chd4Q6PDQ2 AC159819.2-201ENSMUST00000216151 342 ntBASIC16.36■□□□□ 0.21
Chd4Q6PDQ2 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC16.36■□□□□ 0.21
Chd4Q6PDQ2 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC16.36■□□□□ 0.21
Chd4Q6PDQ2 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chd4Q6PDQ2 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC16.36■□□□□ 0.21
Chd4Q6PDQ2 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chd4Q6PDQ2 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chd4Q6PDQ2 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chd4Q6PDQ2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chd4Q6PDQ2 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 Gm7722-201ENSMUST00000120646 741 ntBASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 Gm12164-201ENSMUST00000121695 551 ntBASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 Gm9211-201ENSMUST00000182882 975 ntBASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 Gm10774-201ENSMUST00000188689 204 ntBASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 Gm8365-201ENSMUST00000197334 648 ntBASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 Gm42997-202ENSMUST00000200321 985 ntBASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 Gm18041-201ENSMUST00000218210 618 ntBASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 Gm45266-201ENSMUST00000210111 2173 ntBASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd4Q6PDQ2 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Chd4Q6PDQ2 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd4Q6PDQ2 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chd4Q6PDQ2 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC16.34■□□□□ 0.21
Chd4Q6PDQ2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Chd4Q6PDQ2 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chd4Q6PDQ2 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd4Q6PDQ2 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC16.34■□□□□ 0.21
Chd4Q6PDQ2 Gm21998-201ENSMUST00000117552 1308 ntBASIC16.34■□□□□ 0.21
Chd4Q6PDQ2 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd4Q6PDQ2 Gm9072-201ENSMUST00000218390 1514 ntBASIC16.34■□□□□ 0.21
Chd4Q6PDQ2 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd4Q6PDQ2 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chd4Q6PDQ2 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Chd4Q6PDQ2 Gm15595-201ENSMUST00000120840 961 ntBASIC16.34■□□□□ 0.21
Chd4Q6PDQ2 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd4Q6PDQ2 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Chd4Q6PDQ2 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Chd4Q6PDQ2 Gm42629-201ENSMUST00000199063 1102 ntBASIC16.34■□□□□ 0.21
Chd4Q6PDQ2 AC135469.1-201ENSMUST00000225984 772 ntBASIC16.34■□□□□ 0.21
Chd4Q6PDQ2 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd4Q6PDQ2 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd4Q6PDQ2 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Chd4Q6PDQ2 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd4Q6PDQ2 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd4Q6PDQ2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd4Q6PDQ2 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd4Q6PDQ2 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chd4Q6PDQ2 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chd4Q6PDQ2 Gm45643-201ENSMUST00000211364 1484 ntBASIC16.33■□□□□ 0.21
Chd4Q6PDQ2 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Chd4Q6PDQ2 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC16.33■□□□□ 0.21
Chd4Q6PDQ2 Gm13611-201ENSMUST00000118269 318 ntBASIC16.33■□□□□ 0.21
Chd4Q6PDQ2 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC16.33■□□□□ 0.21
Chd4Q6PDQ2 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC16.33■□□□□ 0.21
Chd4Q6PDQ2 Gm15432-201ENSMUST00000121106 195 ntBASIC16.33■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms